Pairwise Alignments
Query, 238 a.a., ribonuclease PH from Vibrio cholerae E7946 ATCC 55056
Subject, 712 a.a., polyribonucleotide nucleotidyltransferase Pnp from Phaeobacter inhibens DSM 17395
Score = 52.4 bits (124), Expect = 2e-11
Identities = 53/203 (26%), Positives = 83/203 (40%), Gaps = 24/203 (11%)
Query: 2 RPDNRAADQVRPIKITRHYTAYAEGSVLVEFGNTKVLCNASIEEGVPRW----LKGQGKG 57
R D R+ VR I+ GS L G T+ L ++ G L G K
Sbjct: 318 RIDGRSTTDVRAIESETGMLPRTHGSALFTRGETQALAVTTLGTGDDEQFIDALHGNFKS 377
Query: 58 WVTAEYGMLPRATHSRTRREATNGKQGGRTMEIQRLIARSLRAVVDLEAMGEIMITVDCD 117
Y P + R G G R + +L R+L+AV+ I V +
Sbjct: 378 NFLLHYNFPPYSVGEVGR----VGSPGRREIGHGKLAWRALQAVLPAPTDFPYTIRVVSE 433
Query: 118 VIQADGGTRTASITGASVALADAFAHLIAKGQLKKNPMKGHVAAVSVGILGED-----VL 172
+ +++G + AS+ G S+++ DA P+K VA V++G++ ED +L
Sbjct: 434 ITESNGSSSMASVCGGSLSMMDAGV-----------PLKAPVAGVAMGLILEDDGSYAIL 482
Query: 173 CDLEYVEDSAADTDMNVVMTEEG 195
D+ ED D D V T++G
Sbjct: 483 SDILGDEDHLGDMDFKVAGTDKG 505
Score = 25.8 bits (55), Expect = 0.002
Identities = 47/225 (20%), Positives = 78/225 (34%), Gaps = 38/225 (16%)
Query: 24 AEGSVLVEFGNTKVLCNASIEEGVPRWLKGQGKGWVTAEY-------GMLPRATHSRTRR 76
A+G+V+ G T V+ N + + GQ +T Y G +P R R
Sbjct: 27 ADGTVIATLGETSVMANVTFAR---QQKPGQDFFPLTVHYQEKYYAAGKVPGGFFKREAR 83
Query: 77 EATNGKQGGRTMEIQRLIARSLRAVVDLEAMGEIMITVDCDVIQAD--GGTRTASITGAS 134
+ RLI R +R + E+++ C V+ D ++ AS
Sbjct: 84 PTE------KETLTARLIDRPIRPLFVPGFKNEVLVM--CTVLSHDLVNDPDMVAMIAAS 135
Query: 135 VALADAFAHLIAKGQLKKNPMKGHVAAVSVGILGEDVLCDLEYVEDSAADTDMNVVMTEE 194
AL L P G +AA VG G EYV + D ++ + +
Sbjct: 136 AALT-----------LSGAPFMGPIAAARVGFEGG------EYVLNPTVDDMQDLRLNPD 178
Query: 195 GKM-IEIQGTAEGEPFSHEQLLELLAVAKKGIADIVAVQKASLLD 238
++ + + GT + + EL G Q ++D
Sbjct: 179 QRLDLVVAGTKDAVMMVESEAYELTEAEMLGAVKFAHEQIQPVID 223