Pairwise Alignments

Query, 238 a.a., ribonuclease PH from Vibrio cholerae E7946 ATCC 55056

Subject, 707 a.a., polyribonucleotide nucleotidyltransferase from Dechlorosoma suillum PS

 Score = 63.2 bits (152), Expect = 1e-14
 Identities = 65/240 (27%), Positives = 103/240 (42%), Gaps = 24/240 (10%)

Query: 2   RPDNRAADQVRPIKITRHYTAYAEGSVLVEFGNTKVLCNASI----EEGVPRWLKGQGKG 57
           R D R    VRPI +         GS L   G T+ L  A++    +E +   L G+ K 
Sbjct: 315 RIDGRDTRTVRPITVRTGVLPRTHGSALFTRGETQGLVVATLGTSRDEQIIDALAGEYKD 374

Query: 58  WVTAEYGMLPRATHSRTRREATNGKQGGRTMEIQRLIARSLRAVVDLEAMGEIMITVDCD 117
                Y M P AT    R  +   ++ G      RL  R+L AV+         + V  +
Sbjct: 375 RFMLHYNMPPYATGETGRVGSPKRREIGHG----RLAKRALLAVLPPADEFSYSMRVVSE 430

Query: 118 VIQADGGTRTASITGASVALADAFAHLIAKGQLKKNPMKGHVAAVSVGILGED----VLC 173
           + +++G +  AS+ G S+AL DA             P+K HVA +++G++ E     VL 
Sbjct: 431 ITESNGSSSMASVCGGSLALMDAGV-----------PLKSHVAGIAMGLIKEGNRFAVLT 479

Query: 174 DLEYVEDSAADTDMNVVMTEEGKMIEIQGTAEGEPFSHEQLLELLAVAKKGIADIVAVQK 233
           D+   ED   D D  V  T+ G +  +Q   + +  + E +   L  AK G   I+ + +
Sbjct: 480 DILGDEDHLGDMDFKVAGTDSG-ITALQMDIKIQGITKEIMAVALDQAKAGRLHILNIMQ 538



 Score = 28.5 bits (62), Expect = 4e-04
 Identities = 50/203 (24%), Positives = 80/203 (39%), Gaps = 29/203 (14%)

Query: 24  AEGSVLVEFGNTKVLCNASIEEGVPRWLKGQGKGWVTAEYGMLPRATHSRTRREATNGKQ 83
           A G+VLV   +T VL       G  +   GQ    +T +Y      T++  +      K+
Sbjct: 27  ASGAVLVTVDDTVVLVTVV---GAKQAKPGQDFFPLTVDY---VEKTYAAGKIPGGFFKR 80

Query: 84  GGRTMEIQ----RLIARSLRAVVDLEAMGEIMITVDCDVIQADGGTRTASITGASVALAD 139
            GR  E +    RLI R +R +       E+ +      +  +  +   ++ GAS ALA 
Sbjct: 81  EGRPSEKETLTSRLIDRPIRPLFPEGFYNEVQVVATVMSLNPEVDSDIPALIGASAALA- 139

Query: 140 AFAHLIAKGQLKKNPMKGHVAAVSVGIL-GEDVL-CDLEYVEDSAAD-----TDMNVVMT 192
                     +   P  G + A  VG + G+ VL      ++DS  D     T   V+M 
Sbjct: 140 ----------ISGIPFSGPIGAARVGYIDGQYVLNPSATQLKDSKLDLVVAGTQSAVLMV 189

Query: 193 E-EGKMIEIQGTAEGEPFSHEQL 214
           E E K +  +       + HEQ+
Sbjct: 190 ESEAKELSEEVMLGAVVYGHEQM 212