Pairwise Alignments

Query, 238 a.a., ribonuclease PH from Vibrio cholerae E7946 ATCC 55056

Subject, 712 a.a., polyribonucleotide nucleotidyltransferase/polynucleotide adenylyltransferase from Caulobacter crescentus NA1000

 Score = 49.7 bits (117), Expect = 2e-10
 Identities = 58/233 (24%), Positives = 96/233 (41%), Gaps = 16/233 (6%)

Query: 1   MRPDNRAADQVRPIKITRHYTAYAEGSVLVEFGNTKVLCNASIEEGVPRW----LKGQGK 56
           +R D R    VRPI           GS L   G T+ +  A++  G        L+G  K
Sbjct: 316 LRIDGRDVKTVRPILGEVGILPRTHGSALFTRGETQAIVVATLGTGDDEQFIDALEGTYK 375

Query: 57  GWVTAEYGMLPRATHSRTRREATNGKQGGRTMEIQRLIARSLRAVVDLEAMGEIMITVDC 116
                 Y   P +     R     G  G R +   +L  R+LR ++  +      I +  
Sbjct: 376 ESFLLHYNFPPYSVGETGRM----GSPGRREIGHGKLAWRALRPMLPTKEDFPYTIRLVS 431

Query: 117 DVIQADGGTRTASITGASVALADAFAHLIAKGQLKKNPMKGHVAAVSVGILGEDVLCDLE 176
           ++ +++G +  A++ G+S+A+ DA   L+        P+ G    + +   G  VL D+ 
Sbjct: 432 EITESNGSSSMATVCGSSLAMMDAGVPLV-------RPVSGIAMGLILEQDGFAVLSDIL 484

Query: 177 YVEDSAADTDMNVVMTEEGKMIEIQGTAEGEPFSHEQLLELLAVAKKGIADIV 229
             ED   D D  V  T EG +  +Q   +    +   + + LA AK+G A I+
Sbjct: 485 GDEDHLGDMDFKVAGTSEG-LTSLQMDIKIAGITPAIMEQALAQAKEGRAHIL 536



 Score = 28.9 bits (63), Expect = 3e-04
 Identities = 47/206 (22%), Positives = 74/206 (35%), Gaps = 35/206 (16%)

Query: 24  AEGSVLVEFGNTKVLCNASI-------EEGVPRWLKGQGKGWVTAEYGMLPRATHSRTRR 76
           A+G+VL   G T VL  A         ++  P  +  Q K   T   G +P     R   
Sbjct: 27  ADGAVLATMGETVVLATAVFAKSQKPGQDFFPLTVNYQEK---TFAAGKIPGGFFKR--- 80

Query: 77  EATNGKQGGRTMEIQRLIARSLRAVVDLEAMGEIMITVDCDVIQADGGTRTASITGASVA 136
               G+   +   + RLI R +R +       E+ + V       +       +  AS A
Sbjct: 81  ---EGRPSEKETLVSRLIDRPIRPLFVKGFKNEVQVVVTVLQHDLENDPDILGMVAASAA 137

Query: 137 LADAFAHLIAKGQLKKNPMKGHVAAVSVGILGEDVLCDLEYVEDSAADTDMNVVMTEEGK 196
           L            L   P  G + A  VG +    + +    E   +  D+ V  T +  
Sbjct: 138 LC-----------LSGAPFMGPIGAARVGWVDGAYVLNPTLDEMKESKMDLVVAGTADAV 186

Query: 197 MI---EIQGTAE-----GEPFSHEQL 214
           M+   EIQ  +E     G  F+H+Q+
Sbjct: 187 MMVESEIQELSEEIVLGGVNFAHQQM 212