Pairwise Alignments

Query, 288 a.a., YicC family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 287 a.a., hypothetical protein (RefSeq) from Shewanella loihica PV-4

 Score =  360 bits (925), Expect = e-104
 Identities = 180/288 (62%), Positives = 225/288 (78%), Gaps = 1/288 (0%)

Query: 1   MIYSMTAYARKEVKGDWGSAVWEIRSVNQRYLETYFRLPEQFRGLEPLLRERFRQRLSRG 60
           MI SMTAYAR E K  WG+A WEIRSVNQRYLETY RLPEQ R LEP+LR+R R+RL+RG
Sbjct: 1   MIQSMTAYARIEHKAQWGTASWEIRSVNQRYLETYLRLPEQLRSLEPVLRDRLRKRLNRG 60

Query: 61  KIECHLRFEANPAAQSHLTINEGLAQQVINAANQIMHMTGELSRINPFQVMQWPGVMETP 120
           KIE +LR++      + L +N+ LA Q+I AAN +    G+   IN   V++WPGVM   
Sbjct: 61  KIEVNLRYDLGEEKNNDLQLNQALASQIIQAANWVKQEAGQ-GEINIVDVLRWPGVMSGS 119

Query: 121 EQDMDAINQALLSAFDEGVDEFIAARGREGDNMKALIEQRLQAISAEVVKVRARMPEILE 180
           EQDMDAI + LLSAFD  VD+FI ARGREGD +K ++E RL+AI  +V  VR  MP +++
Sbjct: 120 EQDMDAIGKELLSAFDSAVDQFIEARGREGDAIKTMLETRLEAIEGQVAIVRQHMPTVMQ 179

Query: 181 WQRERLFSKFEEAKIELDASRVEQELILLAQKSDVAEELDRLDSHVKEAREVLKKGGSCG 240
           WQR++L ++  E + ELD +R+EQE++LLAQK DVAEE+DRLD+HV E R +LKKGG+ G
Sbjct: 180 WQRDKLTNRLAEIQGELDPARLEQEMVLLAQKMDVAEEMDRLDAHVAETRRILKKGGAQG 239

Query: 241 RKLDFMMQEFNRESNTLASKSISTDITASGVELKVLIEQMREQIQNIE 288
           R+LDFMMQEFNRESNTLASKSIS+++TA+ VELKVLIEQMREQIQN+E
Sbjct: 240 RRLDFMMQEFNRESNTLASKSISSEVTAAAVELKVLIEQMREQIQNVE 287