Pairwise Alignments

Query, 288 a.a., YicC family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 287 a.a., conserved hypothetical protein TIGR00255 (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  351 bits (901), Expect = e-102
 Identities = 174/288 (60%), Positives = 227/288 (78%), Gaps = 1/288 (0%)

Query: 1   MIYSMTAYARKEVKGDWGSAVWEIRSVNQRYLETYFRLPEQFRGLEPLLRERFRQRLSRG 60
           MI SMTAYAR E K  WG+A WEIRSVNQRYLETY RLPEQFR  EP+LR+R R RLSRG
Sbjct: 1   MIQSMTAYARIEHKAQWGTASWEIRSVNQRYLETYLRLPEQFRSFEPVLRDRLRNRLSRG 60

Query: 61  KIECHLRFEANPAAQSHLTINEGLAQQVINAANQIMHMTGELSRINPFQVMQWPGVMETP 120
           K+E +LR+E    + + L +N+GLA+Q+++AA+ +    G+   +N   +++WPGV+ + 
Sbjct: 61  KVEVNLRYELADNSNNELKLNQGLAKQLLDAASWLKQEAGQ-GEVNLTDILRWPGVLSSA 119

Query: 121 EQDMDAINQALLSAFDEGVDEFIAARGREGDNMKALIEQRLQAISAEVVKVRARMPEILE 180
           EQDMDAI   L++AFD  +D+FI ARGREG  +K ++  RL  +S ++  VR  MP+++E
Sbjct: 120 EQDMDAIGADLMTAFDLAIDQFIEARGREGAAIKDMLLSRLDGVSEQIAIVREHMPKVME 179

Query: 181 WQRERLFSKFEEAKIELDASRVEQELILLAQKSDVAEELDRLDSHVKEAREVLKKGGSCG 240
           +QR++L ++  E K ELD +R+EQE+ILLAQK DVAEE+DRL++HV EAR +LKKGGS G
Sbjct: 180 YQRDKLTNRLAEIKGELDPARIEQEMILLAQKQDVAEEMDRLEAHVNEARRILKKGGSEG 239

Query: 241 RKLDFMMQEFNRESNTLASKSISTDITASGVELKVLIEQMREQIQNIE 288
           R+LDFMMQEFNRESNTLASKSIST+ITA+ V+LKVLIEQMREQIQN+E
Sbjct: 240 RRLDFMMQEFNRESNTLASKSISTEITAAAVDLKVLIEQMREQIQNVE 287