Pairwise Alignments

Query, 481 a.a., PTS N-acetylmuramic acid EIIBC component from Vibrio cholerae E7946 ATCC 55056

Subject, 619 a.a., Beta-glucoside phosphotransferase system, IIA/IIB/IIC components (from data) from Klebsiella michiganensis M5al

 Score =  163 bits (412), Expect = 2e-44
 Identities = 127/467 (27%), Positives = 215/467 (46%), Gaps = 45/467 (9%)

Query: 6   QTMMAQVLSLVGGSGNVAKCGNCMTRLRLTLNNSALADHAALKKISGVMGVVESDAQLQI 65
           + +   +L+ VGG  N+    +C TRLR  L +S  AD   LK   GV+ VVES  Q Q+
Sbjct: 4   KALAQDILTRVGGRENIVSLVHCATRLRFKLKDSKKADAEGLKANPGVIMVVESGGQFQV 63

Query: 66  ILGPGKAQTAADMMNALIESGDNVAPAVSEADLSTIAAQQKKQMKSKQTSAVQRFLSKFA 125
           ++G        D+  A+           SEA L+     +   +K ++ S + + +   +
Sbjct: 64  VIG----NHVHDVWLAV----------RSEAGLTD--DSEPVAVKGEKVSLIGQLIDIVS 107

Query: 126 TIFTPLIPGFIAAGLLLGIATLLEQIYVVGQTPSEFMLDLVAYLKVFGKGLFAFLSILIG 185
            IFTP I    A+G+L G+  L      +    + + +   A        LF F  + +G
Sbjct: 108 GIFTPFIGVLAASGILKGLLALAVVCGWLTTQQATYKIWFAA-----SDALFFFFPLFLG 162

Query: 186 YNAQQAFGGSG-----VNGAILASLFVLGYD----PEATKGIYSGMSEFFGFAIDPRGNI 236
           Y A + FGG+      + GA+   L +  +D    P A    + G+   F   I+   ++
Sbjct: 163 YTAGKKFGGNPFITMVIGGALTHPLMIQAFDASMAPGAATEYFLGIPVTF---INYSSSV 219

Query: 237 IGVLLAAILGAQVERKVREYMPDDLDMILTSVVTLLIMGAVTFLIIMPIG---GELFKGM 293
           I ++LA+ +   +E++    +P  +    T  + L ++  +TFLII P+     +L    
Sbjct: 220 IPIILASWVSCWIEKRSNAILPSSMKNFFTPAICLAVVVPLTFLIIGPVATWLSQLLANG 279

Query: 294 SWLFLNLNDNPLGAAILAGLFLISVVFGIHQGFVPVYFALMEAQGFNSLFPILAMAGAGQ 353
             L   +     GAA +  L+ + V+FG+H G +P+    +   G +S+ P+L  A  GQ
Sbjct: 280 YQLIYQVAPWLAGAA-MGALWQVCVIFGLHWGLIPLMINNLAVLGHDSMMPMLLPAVMGQ 338

Query: 354 VGASLALYARAKKETTIRTQIKGAIIPGILGIGEPLIYGVTLPRVKPFVTACIGGAAGGF 413
           VGA+L ++ R  ++   +     A+  GI G+ EP IYG+ LP  +PF+  C+ GA GG 
Sbjct: 339 VGAALGIFLRT-RDARQKVLAGSAVSAGIFGVTEPAIYGLNLPLRRPFIFGCVAGAIGGA 397

Query: 414 FIGLISYLGLPVGLNTVF------GPSGVVAIPLMTSADGIFAGMAV 454
            +G         G   +F       P G+ A  +   A G+FA + +
Sbjct: 398 MVGFSDSHVYSFGFGNIFTLAQMIPPEGIDA-TVWGGAAGMFASLII 443