Pairwise Alignments

Query, 282 a.a., MurR/RpiR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 288 a.a., Helix-turn-helix protein RpiR:Sugar isomerase (SIS) from Pseudomonas syringae pv. syringae B728a

 Score = 94.4 bits (233), Expect = 3e-24
 Identities = 66/281 (23%), Positives = 128/281 (45%), Gaps = 5/281 (1%)

Query: 2   SVLQRIVSRRTQLSESGRQIGDWVLANAAQAAAMTSQDLAAWANVSQSSIVKFTQRLGFK 61
           ++L++I  R  +L+++ R++ + +L N   A  ++   LA  A VS+ ++ +F +     
Sbjct: 6   NLLEQIQGRLDELNKAERKVAEVILLNPQMATRLSIAALAQAAKVSEPTVNRFCRSFSVS 65

Query: 62  GYSEFKLALTEELGRKQVMVNQPLHSNILADDPVAVIAQKLVQTKTEAMFHTTNALRLDE 121
           GY E KL L + L      V++ +     ADD      QK+  +   ++      L    
Sbjct: 66  GYPELKLQLAQSLASGAAYVSRAVE----ADDNPEAYTQKIFGSAIASLDSACQQLDPAL 121

Query: 122 FSEAISWIQQAVRVQIIGIGGSALVAKDLAFKLLKLGITALTEQDSHVQIATARTLHSQD 181
            S+++  + QA ++   G+G SA VA D   K  +  +      D  +Q   A   H+ +
Sbjct: 122 ISKSVDMLIQARQIHFFGLGASAPVALDAQHKFFRFNLAVTAHADVLMQRMIASVAHTGE 181

Query: 182 VLIAISFSGEKREILIAAEAAKQQGAKVIALTTPNKNRLREIADLALDTIADETQHRSSA 241
           + + IS++G  RE++  A  A+  GA V+ LT    + L + + ++L+    E       
Sbjct: 182 LFVIISYTGRTRELVEVARIARANGASVLGLTAAG-SPLAQASTVSLNIPLPEDTDIYMP 240

Query: 242 IASRTAQNVLTDLIFLTLTQQRETSARQLIDDISSDIRQMR 282
           + SR  Q  + D++   +T +R    +  +  I   +   R
Sbjct: 241 MTSRIIQLTVLDVLATGMTLRRGVDFQPHLRKIKESLNDSR 281