Pairwise Alignments

Query, 653 a.a., Fe(3+)-hydroxamate ABC transporter permease FhuB from Vibrio cholerae E7946 ATCC 55056

Subject, 336 a.a., ABC transporter (iron.B12.siderophore.hemin) , permease component from Pseudomonas fluorescens FW300-N2E2

 Score =  135 bits (339), Expect = 4e-36
 Identities = 88/302 (29%), Positives = 152/302 (50%), Gaps = 4/302 (1%)

Query: 350 IAAALLLALSLHIGWQMESASWALPSE-FQWPLRWPRMLTALFAGVGLAIAGTLLQRLIY 408
           +  A++  + L+  + + SA W+   E   W +R PR+L     G GLA+ G +LQ +  
Sbjct: 32  VPVAVVWDILLNKAFGVGSAYWSPGQEHIVWLIRVPRLLLGALVGAGLALIGAVLQAVTR 91

Query: 409 NPLASPDILGVSSGATFALVFASLFLGQSLQS-THWMTALLGSA-AVLVALLLLGRRHHY 466
           NPLA P +LGV+SGAT   V   L +G+ +   T  + A +G+  ++L+ L +  R+   
Sbjct: 92  NPLADPHLLGVTSGATLGAVIVVLHVGEIVGLLTLPLAAFIGALLSMLLVLTIAARQGRL 151

Query: 467 APSSLILTGIAITALLEALVQFTLAKGTGD-SYQILLWLSGSTYRATGEQALLLSVGVVG 525
               L+L G+A++ ++ A     L  G    S  ++ W+ G    A  E   + +  VV 
Sbjct: 152 ESDRLLLCGVAVSFVMMAAANLLLFLGDHRASSAVMFWMLGGLGLARWELLAVPAASVVL 211

Query: 526 LTLLALGLSRWLTLISIGRGFASARGLSASRASLVLLILVALLCALVTATMGPVSFVGLI 585
             +L LG++R L  +  G   A   GL+A++  L + ++ +L+  ++ +  G + FVGL+
Sbjct: 212 GLVLLLGMARPLNALMAGEQTAVTLGLNAAKVRLWIFLIASLMTGVLVSISGSIGFVGLM 271

Query: 586 APHMAMMLGAQRAPSQLLLAALVGGTLMLWADWLGQALLFPAQIAAGTLVAIIGGSYFLL 645
            PH+A  L        L    L+G   ++W D   + L+ P  +  G   A IGG +F+ 
Sbjct: 272 VPHIARRLVGAEHRRLLPACVLLGSLFLVWVDVAARTLIAPEDLPIGVATAAIGGLFFIG 331

Query: 646 LL 647
           L+
Sbjct: 332 LM 333



 Score =  128 bits (322), Expect = 4e-34
 Identities = 110/328 (33%), Positives = 170/328 (51%), Gaps = 16/328 (4%)

Query: 9   LGALTLLLALVSLQWGH-NLTLNEQWQLVLGH-----QAAQSFAQVNFIYA-QLPRAVMA 61
           LGAL L+  +VSL +G   + +   W ++L        A  S  Q + ++  ++PR ++ 
Sbjct: 13  LGALLLVSCVVSLGFGPARVPVAVVWDILLNKAFGVGSAYWSPGQEHIVWLIRVPRLLLG 72

Query: 62  IVVGAVLGLVGSLMQQLTQNRLTSPLTLGTSSGAWLGLIIVNIWFSDWVADYSA-LAAMA 120
            +VGA L L+G+++Q +T+N L  P  LG +SGA LG +IV +   + V   +  LAA  
Sbjct: 73  ALVGAGLALIGAVLQAVTRNPLADPHLLGVTSGATLGAVIVVLHVGEIVGLLTLPLAAFI 132

Query: 121 GALLAFALIISIAGLRN-LTGLPLVVSGMVVNILLGSIATALVLLNEEFAQNVFM-WGAG 178
           GALL+  L+++IA  +  L    L++ G+ V+ ++ + A  L+ L +  A +  M W  G
Sbjct: 133 GALLSMLLVLTIAARQGRLESDRLLLCGVAVSFVMMAAANLLLFLGDHRASSAVMFWMLG 192

Query: 179 DLAQNGWEWLTWLLPRLALVFPLLLFAPRVLTLLRLGHEGAAARGL--AVLPAFLFLMAG 236
            L    WE L      + L   LLL   R L  L  G + A   GL  A +  ++FL+A 
Sbjct: 193 GLGLARWELLAVPAASVVLGLVLLLGMARPLNALMAGEQTAVTLGLNAAKVRLWIFLIAS 252

Query: 237 GIWLVSASITAVGVIGFIGLLTPNIARSLGARTTKMELYSSALLGALLLLATDMLAMGLS 296
            +  V  SI+  G IGF+GL+ P+IAR L     +  L +  LLG+L L+  D+ A  L 
Sbjct: 253 LMTGVLVSIS--GSIGFVGLMVPHIARRLVGAEHRRLLPACVLLGSLFLVWVDVAARTLI 310

Query: 297 VWAEEVVPSGITAAVIGAPALIWFSRRQ 324
             A E +P G+  A IG    I   RR+
Sbjct: 311 --APEDLPIGVATAAIGGLFFIGLMRRR 336