Pairwise Alignments
Query, 653 a.a., Fe(3+)-hydroxamate ABC transporter permease FhuB from Vibrio cholerae E7946 ATCC 55056
Subject, 343 a.a., transport system permease protein from Pseudomonas syringae pv. syringae B728a
Score = 150 bits (379), Expect = 9e-41
Identities = 97/274 (35%), Positives = 147/274 (53%), Gaps = 4/274 (1%)
Query: 381 LRWPRMLTALFAGVGLAIAGTLLQRLIYNPLASPDILGVSSGATFALVFASLFLGQSLQS 440
LR PR+ A G LA++G +LQ +I NPLASPD+LG++SGA+ A V F +L +
Sbjct: 70 LRMPRLALAALVGAALAVSGLILQSIIRNPLASPDLLGITSGASAAAVLYLSFFSAALGA 129
Query: 441 THW-MTALLGSAAVLVALLLLGRRHHYAPSSLILTGIAITALLEALVQFTLA-KGTGDSY 498
+ A+ G+ + + LL +P ++L G+ ++ALL A+ F L +
Sbjct: 130 QFLPLAAISGAGLAALVIYLLAWNQGASPLRMVLIGVGVSALLAAVTTFILVFSPLTTTL 189
Query: 499 QILLWLSGSTYRATG-EQALLLSVGVVGLTLLALGLSRWLTLISIGRGFASARGLSASRA 557
+WL+GS Y A+ E L ++ L LLAL L+R + + + A G+
Sbjct: 190 SAYVWLTGSVYGASWPEPRALAGWLLMTLPLLAL-LARQVRMQQLDDALAQGIGVRVQWL 248
Query: 558 SLVLLILVALLCALVTATMGPVSFVGLIAPHMAMMLGAQRAPSQLLLAALVGGTLMLWAD 617
LL++ L L A G ++FVGLIAPH+A L Q L+AAL+G L++ AD
Sbjct: 249 RAGLLLVSVALAGLAVAWGGAIAFVGLIAPHIAKRLMPPGFVGQALMAALIGANLVMLAD 308
Query: 618 WLGQALLFPAQIAAGTLVAIIGGSYFLLLLLSQR 651
G+ L P + AG VA++G +FL LL++QR
Sbjct: 309 LAGRTLFLPLDLPAGIFVAVLGTPFFLYLLINQR 342
Score = 113 bits (283), Expect = 1e-29
Identities = 99/323 (30%), Positives = 168/323 (52%), Gaps = 20/323 (6%)
Query: 6 LTGLGALTLLLALVSLQWGHNLTLNEQWQLVLGHQAAQSFAQVNFIYAQL--PRAVMAIV 63
L+GL ALTLL+ L SL G +N +L Q+ A + FI QL PR +A +
Sbjct: 25 LSGL-ALTLLVVLSSLAVGK---INLSPATLLSVFTGQADASLVFIVEQLRMPRLALAAL 80
Query: 64 VGAVLGLVGSLMQQLTQNRLTSPLTLGTSSGAWLGLIIVNIWFSDWV-ADYSALAAMAGA 122
VGA L + G ++Q + +N L SP LG +SGA ++ +FS + A + LAA++GA
Sbjct: 81 VGAALAVSGLILQSIIRNPLASPDLLGITSGASAAAVLYLSFFSAALGAQFLPLAAISGA 140
Query: 123 LLAFALIISIAGLRNLTGLPLVVSGMVVNILLGSIATALVLLNE-EFAQNVFMWGAGDLA 181
LA +I +A + + L +V+ G+ V+ LL ++ T +++ + + ++W G +
Sbjct: 141 GLAALVIYLLAWNQGASPLRMVLIGVGVSALLAAVTTFILVFSPLTTTLSAYVWLTGSVY 200
Query: 182 QNGWEWLTWLLPRLALVFPLLLFAPRVLTLLRLGHEGAAARGLAVLPAFLFLMAGGIWLV 241
W L L + PLL R + + +L + A A+G+ V +L G+ LV
Sbjct: 201 GASWPEPRALAGWLLMTLPLLALLARQVRMQQL--DDALAQGIGVRVQWL---RAGLLLV 255
Query: 242 SASITAV-----GVIGFIGLLTPNIARSLGARTTKMELYSSALLGALLLLATDMLAMGLS 296
S ++ + G I F+GL+ P+IA+ L + +AL+GA L++ D+ G +
Sbjct: 256 SVALAGLAVAWGGAIAFVGLIAPHIAKRLMPPGFVGQALMAALIGANLVMLADL--AGRT 313
Query: 297 VWAEEVVPSGITAAVIGAPALIW 319
++ +P+GI AV+G P ++
Sbjct: 314 LFLPLDLPAGIFVAVLGTPFFLY 336
Score = 31.6 bits (70), Expect = 6e-05
Identities = 81/357 (22%), Positives = 139/357 (38%), Gaps = 59/357 (16%)
Query: 137 NLTGLPLVVSGMVVNIL--LGSIATALVLLNEEFAQNVFMWGAGDLAQNGWEWLTWLLPR 194
+LT L ++SG+ + +L L S+A + L+ +VF A E L +PR
Sbjct: 17 SLTALTRLLSGLALTLLVVLSSLAVGKINLSPATLLSVFTGQADASLVFIVEQLR--MPR 74
Query: 195 LALVFPLLLFAPRVLTLLRLGHEGAAARGLAVLPAFLFLMAGGIWLVSASITAVGVIGFI 254
LAL L+ A ++ L L + R P L + +G AS AV + F
Sbjct: 75 LALA--ALVGAALAVSGLILQ---SIIRNPLASPDLLGITSG------ASAAAVLYLSFF 123
Query: 255 GLLTPNIARSLGARTTKMELYSSALLGALLLLATDMLAMGLSVWAEEVVPSGITAAVIGA 314
+ +LGA+ + S A L AL++ L W + P + +G
Sbjct: 124 -------SAALGAQFLPLAAISGAGLAALVIY--------LLAWNQGASPLRMVLIGVGV 168
Query: 315 PALIWFSRRQLQAQDSLSISLSSH--------------RRSPSRWAVMLIAAALLLALSL 360
AL+ + L+ +LS++ R+ + W +M + LLA +
Sbjct: 169 SALLAAVTTFILVFSPLTTTLSAYVWLTGSVYGASWPEPRALAGWLLMTLPLLALLARQV 228
Query: 361 HIGWQMESASWALPSEFQWPLRWPRMLTALFAGVGLAIAGT-----LLQRLIYNPLASPD 415
+ ++ + + QW +++ AG+ +A G L+ I L P
Sbjct: 229 RMQQLDDALAQGIGVRVQWLRAGLLLVSVALAGLAVAWGGAIAFVGLIAPHIAKRLMPPG 288
Query: 416 ILGVSSGATFALVFASLFLGQSLQSTHWMTALLGSAAVLVAL--------LLLGRRH 464
+G + A AL+ A+L + L L A + VA+ LL+ +RH
Sbjct: 289 FVGQALMA--ALIGANLVMLADLAGRTLFLPLDLPAGIFVAVLGTPFFLYLLINQRH 343