Pairwise Alignments

Query, 653 a.a., Fe(3+)-hydroxamate ABC transporter permease FhuB from Vibrio cholerae E7946 ATCC 55056

Subject, 329 a.a., transport system permease protein from Pseudomonas syringae pv. syringae B728a

 Score =  140 bits (354), Expect = 7e-38
 Identities = 99/283 (34%), Positives = 151/283 (53%), Gaps = 7/283 (2%)

Query: 48  VNFIYAQL--PRAVMAIVVGAVLGLVGSLMQQLTQNRLTSPLTLGTSSGAWLGLIIVNIW 105
           + +I AQL  PRA+ A +VGA LG+ G+LMQ +T+NRL SP   G ++GA LGL + +  
Sbjct: 49  IAYIVAQLRVPRALCAALVGACLGVAGALMQGITRNRLASPSLFGVTAGAALGLALFSTG 108

Query: 106 FSDWVADYSALAAMA-GALLAFALIISIAGLRNLTGLP--LVVSGMVVNILLGSIATALV 162
                    AL     G  LA+  + S+ G  +       LV++G+ V  L  ++    V
Sbjct: 109 LVALPFPGGALLMTCLGGALAWITVFSLGGAWSPATAQGRLVLAGVAVAALCAALTRLTV 168

Query: 163 LLNEEFAQNVFMWGAGDLAQNGWEWLTWLLPRLALVFPLLLFAPRVLTLLRLGHEGAAAR 222
           +L E  AQ+V  W AG LA  G   L  L P   +   L +     L L+ LG + A + 
Sbjct: 169 ILVEAQAQSVLNWLAGSLANVGAAQLQLLWPCTLIGVVLAVACAPRLNLINLGEDAARSL 228

Query: 223 GLAVLPAFLFLMAGGIWLVSASITAVGVIGFIGLLTPNIARSLGARTTKMELYSSALLGA 282
           G+ +    + +    + LV AS+ AVG IGF+GL+ PNIAR       +  +  SA LGA
Sbjct: 229 GVRIGALRMLVFVVSLLLVGASVCAVGPIGFVGLIAPNIARQWLGNDYRWLIPISAGLGA 288

Query: 283 LLLLATDMLAMGLSVWAEEVVPSGITAAVIGAPALIWFSRRQL 325
            ++LA+D+++  ++   E   P+G+  A+IGAP  ++ +RR L
Sbjct: 289 AIVLASDLISRAVAFPVE--TPAGVVTALIGAPFFLFLARRAL 329



 Score =  123 bits (308), Expect = 1e-32
 Identities = 81/269 (30%), Positives = 134/269 (49%), Gaps = 3/269 (1%)

Query: 381 LRWPRMLTALFAGVGLAIAGTLLQRLIYNPLASPDILGVSSGATFAL-VFASLFLGQSLQ 439
           LR PR L A   G  L +AG L+Q +  N LASP + GV++GA   L +F++  +     
Sbjct: 56  LRVPRALCAALVGACLGVAGALMQGITRNRLASPSLFGVTAGAALGLALFSTGLVALPFP 115

Query: 440 STHWMTALLGSAAVLVALLLLGRRHHYAPSS--LILTGIAITALLEALVQFTLAKGTGDS 497
               +   LG A   + +  LG     A +   L+L G+A+ AL  AL + T+      +
Sbjct: 116 GGALLMTCLGGALAWITVFSLGGAWSPATAQGRLVLAGVAVAALCAALTRLTVILVEAQA 175

Query: 498 YQILLWLSGSTYRATGEQALLLSVGVVGLTLLALGLSRWLTLISIGRGFASARGLSASRA 557
             +L WL+GS       Q  LL    +   +LA+  +  L LI++G   A + G+     
Sbjct: 176 QSVLNWLAGSLANVGAAQLQLLWPCTLIGVVLAVACAPRLNLINLGEDAARSLGVRIGAL 235

Query: 558 SLVLLILVALLCALVTATMGPVSFVGLIAPHMAMMLGAQRAPSQLLLAALVGGTLMLWAD 617
            +++ ++  LL       +GP+ FVGLIAP++A           + ++A +G  ++L +D
Sbjct: 236 RMLVFVVSLLLVGASVCAVGPIGFVGLIAPNIARQWLGNDYRWLIPISAGLGAAIVLASD 295

Query: 618 WLGQALLFPAQIAAGTLVAIIGGSYFLLL 646
            + +A+ FP +  AG + A+IG  +FL L
Sbjct: 296 LISRAVAFPVETPAGVVTALIGAPFFLFL 324