Pairwise Alignments

Query, 653 a.a., Fe(3+)-hydroxamate ABC transporter permease FhuB from Vibrio cholerae E7946 ATCC 55056

Subject, 347 a.a., iron-compound ABC transporter, permease protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  137 bits (345), Expect = 8e-37
 Identities = 94/292 (32%), Positives = 152/292 (52%), Gaps = 21/292 (7%)

Query: 373 LPSEFQWPLRWPRMLTALFAGVGLAIAGTLLQRLIYNPLASPDILGVSSGATFALVFASL 432
           L S     LR PR+L A   G GLA++G  LQ +  NPLA P + G+S+GA+   +    
Sbjct: 64  LDSRILLELRLPRILLAFVCGAGLALSGWALQLVTRNPLADPYLFGISAGASLGAIVVL- 122

Query: 433 FLGQSLQSTHWMTALLG---------SAAVLVALLLLGRRHHYAPSSLILTGIAITALLE 483
               SL  TH +   +G         SA+VLV L L G         ++L+G+A + L  
Sbjct: 123 ----SLGITHGVLLAIGLPLGAFIGASASVLVVLTLSGFGLQSQVERMLLSGVATSFLFG 178

Query: 484 ALVQFTLAKGTGD-SYQILLWLSGSTYRATGEQALLLSVGVVGLTLLALGLSRWLTLISI 542
           AL    L   +   +  ++ W  GS  RA  +   L  +   G     L + R L  +S 
Sbjct: 179 ALGSLLLYFSSPQVTASVIFWSLGSFARAAWDLLWLPWLVFGGFVAFLLLVRRQLFALSA 238

Query: 543 GRGFASARGLSASRASLVLLILVALLCALVTATMGPVSFVGLIAPHMAMML--GAQRAPS 600
           G   A A G+S ++  ++ L++ +L+ A++ A+ G + FVGL+ PH+A +L  G+Q    
Sbjct: 239 GDETAHALGVSVAKLRIISLLMCSLMTAVLVASCGGIGFVGLMIPHIARLLFPGSQ---- 294

Query: 601 QLLLAALVGGTLMLWADWLGQALLFPAQIAAGTLVAIIGGSYFLLLLLSQRA 652
            LL+ A++GG  M+W D + ++LL P ++  G + A++G  +FL+LL  +R+
Sbjct: 295 SLLIVAMLGGLFMVWVDVMTRSLLPPQELPVGVITAVVGSVFFLMLLFGRRS 346



 Score =  104 bits (260), Expect = 6e-27
 Identities = 83/279 (29%), Positives = 141/279 (50%), Gaps = 15/279 (5%)

Query: 54  QLPRAVMAIVVGAVLGLVGSLMQQLTQNRLTSPLTLGTSSGAWLGLIIV---NIWFSDWV 110
           +LPR ++A V GA L L G  +Q +T+N L  P   G S+GA LG I+V    I     +
Sbjct: 73  RLPRILLAFVCGAGLALSGWALQLVTRNPLADPYLFGISAGASLGAIVVLSLGITHGVLL 132

Query: 111 ADYSALAAMAGALLAFALIISIAGLRNLTGLP-LVVSGMVVNILLGSIATALVLLNE-EF 168
           A    L A  GA  +  ++++++G    + +  +++SG+  + L G++ + L+  +  + 
Sbjct: 133 AIGLPLGAFIGASASVLVVLTLSGFGLQSQVERMLLSGVATSFLFGALGSLLLYFSSPQV 192

Query: 169 AQNVFMWGAGDLAQNGWE--WLTWLLPRLALVFPLLLFAPRVLTLLRLGHEGAAARGLAV 226
             +V  W  G  A+  W+  WL WL+    + F  LL   R L  L  G E A A G++V
Sbjct: 193 TASVIFWSLGSFARAAWDLLWLPWLVFGGFVAF--LLLVRRQLFALSAGDETAHALGVSV 250

Query: 227 LPAFLFLMAGGIWLVSASITAVGVIGFIGLLTPNIARSLGARTTKMELYSSALLGALLLL 286
               +  +     + +  + + G IGF+GL+ P+IAR L   +    L   A+LG L ++
Sbjct: 251 AKLRIISLLMCSLMTAVLVASCGGIGFVGLMIPHIARLLFPGS--QSLLIVAMLGGLFMV 308

Query: 287 ATDMLAMGLSVWAEEVVPSGITAAVIGAP--ALIWFSRR 323
             D+  M  S+   + +P G+  AV+G+    ++ F RR
Sbjct: 309 WVDV--MTRSLLPPQELPVGVITAVVGSVFFLMLLFGRR 345