Pairwise Alignments

Query, 653 a.a., Fe(3+)-hydroxamate ABC transporter permease FhuB from Vibrio cholerae E7946 ATCC 55056

Subject, 342 a.a., transport system permease protein (NCBI) from Rhodospirillum rubrum S1H

 Score =  122 bits (306), Expect = 3e-32
 Identities = 85/277 (30%), Positives = 138/277 (49%), Gaps = 4/277 (1%)

Query: 379 WPLRWPRMLTALFAGVGLAIAGTLLQRLIYNPLASPDILGVSSGATF-ALVFASLFLGQS 437
           W  R  R L A   G  LA++G +LQ L+ N LA P ILG+S+GA+  A+  A L LG  
Sbjct: 65  WNYRVARALVAASCGASLAVSGVVLQSLLLNALADPYILGISAGASSGAVAVAVLGLGGG 124

Query: 438 LQSTHWMTALLGSAAVLVALLLLGRRHHYAPSSLILTGIAITALLEALVQFTLAK-GTGD 496
           L S   + A LG+      +  +  +    P+++IL GIA + L  AL  F + K  T D
Sbjct: 125 LVSLS-VGAFLGAVLAFALVSFIALKAGRGPAAIILAGIAGSQLFNALTSFVVTKVATAD 183

Query: 497 SYQ-ILLWLSGSTYRATGEQALLLSVGVVGLTLLALGLSRWLTLISIGRGFASARGLSAS 555
             + I+ WL G+          L     +G  ++ L  +R L   + G   A++ G+   
Sbjct: 184 QARGIMFWLLGNLSGVRWPDVSLAVPVALGGLVICLFYARALDAFAFGADSAASLGIPVR 243

Query: 556 RASLVLLILVALLCALVTATMGPVSFVGLIAPHMAMMLGAQRAPSQLLLAALVGGTLMLW 615
           R  ++++ + A   A + + +G + FVGL+ PH+A +    R    L  AAL+G   M+ 
Sbjct: 244 RVYIMMIAIAAGTTATMVSIVGSIGFVGLVIPHVARLTVGVRHNKVLPAAALIGAIFMIA 303

Query: 616 ADWLGQALLFPAQIAAGTLVAIIGGSYFLLLLLSQRA 652
           AD L + ++    +  G + A++G   F L+L+ + A
Sbjct: 304 ADILSRKIIPGQVLPIGVMTALVGAPAFALILMRRPA 340



 Score =  112 bits (281), Expect = 2e-29
 Identities = 77/266 (28%), Positives = 142/266 (53%), Gaps = 6/266 (2%)

Query: 54  QLPRAVMAIVVGAVLGLVGSLMQQLTQNRLTSPLTLGTSSGAWLGLIIVNIWFSDWVADY 113
           ++ RA++A   GA L + G ++Q L  N L  P  LG S+GA  G + V +         
Sbjct: 68  RVARALVAASCGASLAVSGVVLQSLLLNALADPYILGISAGASSGAVAVAVLGLGGGLVS 127

Query: 114 SALAAMAGALLAFALIISIAGLRNLTGLPLVVSGMVVNILLGSIATALV--LLNEEFAQN 171
            ++ A  GA+LAFAL+  IA         ++++G+  + L  ++ + +V  +   + A+ 
Sbjct: 128 LSVGAFLGAVLAFALVSFIALKAGRGPAAIILAGIAGSQLFNALTSFVVTKVATADQARG 187

Query: 172 VFMWGAGDLAQNGWEWLTWLLPRLALVFPLLLFAPRVLTLLRLGHEGAAARGLAVLPAFL 231
           +  W  G+L+   W  ++  +P       + LF  R L     G + AA+ G+ V   ++
Sbjct: 188 IMFWLLGNLSGVRWPDVSLAVPVALGGLVICLFYARALDAFAFGADSAASLGIPVRRVYI 247

Query: 232 FLMAGGIWLVSASITAVGVIGFIGLLTPNIAR-SLGARTTKMELYSSALLGALLLLATDM 290
            ++A      +  ++ VG IGF+GL+ P++AR ++G R  K+ L ++AL+GA+ ++A D+
Sbjct: 248 MMIAIAAGTTATMVSIVGSIGFVGLVIPHVARLTVGVRHNKV-LPAAALIGAIFMIAADI 306

Query: 291 LAMGLSVWAEEVVPSGITAAVIGAPA 316
           L+    +   +V+P G+  A++GAPA
Sbjct: 307 LSR--KIIPGQVLPIGVMTALVGAPA 330