Pairwise Alignments

Query, 653 a.a., Fe(3+)-hydroxamate ABC transporter permease FhuB from Vibrio cholerae E7946 ATCC 55056

Subject, 324 a.a., iron ABC transporter permease from Rahnella sp. WP5

 Score =  140 bits (354), Expect = 7e-38
 Identities = 100/276 (36%), Positives = 145/276 (52%), Gaps = 11/276 (3%)

Query: 381 LRWPRMLTALFAGVGLAIAGTLLQRLIYNPLASPDILGVSSGATFAL---VFASLFLGQS 437
           +R PR+L A+  G  LA +G ++Q L  NPLA P +LG+SSGA  A+   +   L L   
Sbjct: 44  IRLPRVLLAVVVGCALASSGAVMQGLFRNPLADPGLLGISSGAALAVALTIVMPLALPPL 103

Query: 438 LQS-THWMTALLGSAAVLVALLLLGRRHHYAPSSLILTGIAITALLEALVQ-FTLAKGTG 495
           L   +H ++A  GS A+   +  L R  H   S L+L GIAI AL  A V   T      
Sbjct: 104 LALYSHMISAFAGSLAISAIVFTLSRFGHGGLSRLLLAGIAINALCGAAVGVLTYVSDDQ 163

Query: 496 DSYQILLWLSGSTYRATGEQALLLSVGVVGLTLLALGLSRWLTLISIGRGFASARGLSAS 555
              Q  LW  GS  +A      + S  ++   + AL ++R L ++ +G   A   G++  
Sbjct: 164 QLRQFSLWSMGSLGQAQWPTLAVASSLILPACVAALFMARRLNILQLGEEDAHYLGVNVR 223

Query: 556 RASLVLLILVALLCALVTATMGPVSFVGLIAPH-MAMMLGAQRAPSQLLL--AALVGGTL 612
           R  L LL+L ALL     A  G + F+GL+ PH + M +GA     + LL  +A+ G  L
Sbjct: 224 RTQLQLLLLSALLVGAAVAVSGVIGFIGLVIPHLLRMRIGADH---RWLLPGSAMAGACL 280

Query: 613 MLWADWLGQALLFPAQIAAGTLVAIIGGSYFLLLLL 648
           +L AD L + L+ PA++  G L ++IGG YFL L+L
Sbjct: 281 LLLADTLARTLVAPAEMPVGLLTSLIGGPYFLWLIL 316



 Score =  130 bits (326), Expect = 1e-34
 Identities = 102/323 (31%), Positives = 162/323 (50%), Gaps = 11/323 (3%)

Query: 6   LTGLGALTLLLALVSLQWGHNLTLNEQWQLVLGHQAAQSFAQVNFIYAQLPRAVMAIVVG 65
           + GLG   L+LA+++   G    ++   + +L      S  QV ++  +LPR ++A+VVG
Sbjct: 1   MIGLGGALLVLAVMAANTG---AMSLSLRTLLARPFGDSLWQV-WLTIRLPRVLLAVVVG 56

Query: 66  AVLGLVGSLMQQLTQNRLTSPLTLGTSSGAWLGL---IIVNIWFSDWVADYS-ALAAMAG 121
             L   G++MQ L +N L  P  LG SSGA L +   I++ +     +A YS  ++A AG
Sbjct: 57  CALASSGAVMQGLFRNPLADPGLLGISSGAALAVALTIVMPLALPPLLALYSHMISAFAG 116

Query: 122 ALLAFALIISIAGLRNLTGLPLVVSGMVVNILLGSIATALVLLNEEFAQNVF-MWGAGDL 180
           +L   A++ +++   +     L+++G+ +N L G+    L  ++++     F +W  G L
Sbjct: 117 SLAISAIVFTLSRFGHGGLSRLLLAGIAINALCGAAVGVLTYVSDDQQLRQFSLWSMGSL 176

Query: 181 AQNGWEWLTWLLPRLALVFPLLLFAPRVLTLLRLGHEGAAARGLAVLPAFLFLMAGGIWL 240
            Q  W  L      +       LF  R L +L+LG E A   G+ V    L L+     L
Sbjct: 177 GQAQWPTLAVASSLILPACVAALFMARRLNILQLGEEDAHYLGVNVRRTQLQLLLLSALL 236

Query: 241 VSASITAVGVIGFIGLLTPNIARSLGARTTKMELYSSALLGALLLLATDMLAMGLSVWAE 300
           V A++   GVIGFIGL+ P++ R       +  L  SA+ GA LLL  D LA  L   AE
Sbjct: 237 VGAAVAVSGVIGFIGLVIPHLLRMRIGADHRWLLPGSAMAGACLLLLADTLARTLVAPAE 296

Query: 301 EVVPSGITAAVIGAPALIWFSRR 323
             +P G+  ++IG P  +W   R
Sbjct: 297 --MPVGLLTSLIGGPYFLWLILR 317