Pairwise Alignments

Query, 653 a.a., Fe(3+)-hydroxamate ABC transporter permease FhuB from Vibrio cholerae E7946 ATCC 55056

Subject, 359 a.a., putative iron transport system permease protein from Phaeobacter inhibens DSM 17395

 Score =  118 bits (295), Expect = 5e-31
 Identities = 86/274 (31%), Positives = 139/274 (50%), Gaps = 5/274 (1%)

Query: 54  QLPRAVMAIVVGAVLGLVGSLMQQLTQNRLTSPLTLGTSSGAWLGLIIVNIWFSDWVADY 113
           + PRA++A++VGA L +VG+ +Q +T+N L  P  LG S+G   G I+  +    ++   
Sbjct: 88  RFPRALLAMMVGAGLAMVGASLQAVTRNPLADPHLLGISAGGAFGAILALLHTGLFLGLL 147

Query: 114 SA-LAAMAGALLAFALIISIAGLRNLTGLP-LVVSGMVVNILLGSIATALVLLNEEFAQN 171
           +  L A AGAL A AL+++++     T    LV+ G+ V+ ++ + A  L+ L +  A +
Sbjct: 148 TVPLLAFAGALGATALVLAVSRFAEATTADRLVLVGVAVSFVVMAGANVLIFLGDPRATH 207

Query: 172 -VFMWGAGDLAQNGWEWLTWLLPRLALVFPLLLFAPRVLTLLRLGHEGAAARGLAVLPAF 230
            V  W  G L    W  L + L  L L    L         + +G E A   G+ V    
Sbjct: 208 TVVFWMLGGLGLAQWSHLIYPLVVLVLCGGWLWTKAGDFNAMTVGDETATTLGIPVARFR 267

Query: 231 LFLMAGGIWLVSASITAVGVIGFIGLLTPNIARSLGARTTKMELYSSALLGALLLLATDM 290
           L     G  +    +   G+IGF+GL+ P+IAR +     +  L +SAL+G L L+A D+
Sbjct: 268 LITFTIGALITGVMVAFSGMIGFVGLIVPHIARLIVGGDHRRVLPASALIGGLFLVAADI 327

Query: 291 LAMGLSVWAEEVVPSGITAAVIGAPALIWFSRRQ 324
           LA   ++ A E +P G+   ++G    IW  RR+
Sbjct: 328 LAR--TLMAPEDMPIGLVTGLVGGVFFIWLLRRR 359



 Score =  115 bits (288), Expect = 3e-30
 Identities = 79/279 (28%), Positives = 134/279 (48%), Gaps = 17/279 (6%)

Query: 379 WPLRWPRMLTALFAGVGLAIAGTLLQRLIYNPLASPDILGVSSGATF----ALVFASLFL 434
           W +R+PR L A+  G GLA+ G  LQ +  NPLA P +LG+S+G  F    AL+   LFL
Sbjct: 85  WDIRFPRALLAMMVGAGLAMVGASLQAVTRNPLADPHLLGISAGGAFGAILALLHTGLFL 144

Query: 435 GQSLQSTHWMTALLGSAAVLVALLLLGRRHHYAPSSLILTGIAITALLEALVQFTLAKGT 494
           G            LG+ A+++A+             L+L G+A++ ++ A     +  G 
Sbjct: 145 GLLTVPLLAFAGALGATALVLAVSRFAEAT--TADRLVLVGVAVSFVVMAGANVLIFLGD 202

Query: 495 GDS-YQILLWLSGSTYRATGEQALLLSVGVVGLTLLALGLSRW-----LTLISIGRGFAS 548
             + + ++ W+ G    A     +   V      L+  G   W        +++G   A+
Sbjct: 203 PRATHTVVFWMLGGLGLAQWSHLIYPLV-----VLVLCGGWLWTKAGDFNAMTVGDETAT 257

Query: 549 ARGLSASRASLVLLILVALLCALVTATMGPVSFVGLIAPHMAMMLGAQRAPSQLLLAALV 608
             G+  +R  L+   + AL+  ++ A  G + FVGLI PH+A ++        L  +AL+
Sbjct: 258 TLGIPVARFRLITFTIGALITGVMVAFSGMIGFVGLIVPHIARLIVGGDHRRVLPASALI 317

Query: 609 GGTLMLWADWLGQALLFPAQIAAGTLVAIIGGSYFLLLL 647
           GG  ++ AD L + L+ P  +  G +  ++GG +F+ LL
Sbjct: 318 GGLFLVAADILARTLMAPEDMPIGLVTGLVGGVFFIWLL 356