Pairwise Alignments

Query, 653 a.a., Fe(3+)-hydroxamate ABC transporter permease FhuB from Vibrio cholerae E7946 ATCC 55056

Subject, 348 a.a., iron ABC transporter permease from Methanococcus maripaludis S2

 Score =  115 bits (289), Expect = 2e-30
 Identities = 79/284 (27%), Positives = 143/284 (50%), Gaps = 18/284 (6%)

Query: 379 WPLRWPRMLTALFAGVGLAIAGTLLQRLIYNPLASPDILGVSSGATFALVFASLFLG-QS 437
           W +R PR+  A+  G+GL+++G ++Q ++ NPLASP  +G+S GA F    A + LG   
Sbjct: 63  WNIRLPRIFAAILCGIGLSVSGAVMQCVLRNPLASPYTMGISHGAMFGACVAIITLGIGG 122

Query: 438 LQSTHWMT----------ALLGSAAVLVALLLLGRRHHYAPSSLILTGIAITALLEALVQ 487
            +ST  +           A LGS   + A+L+L +    +P +++L G+AI++L  A   
Sbjct: 123 AESTGHIAINNPYSITIFAFLGSLLGVCAVLILAKLKGLSPEAMVLAGVAISSLFTAAT- 181

Query: 488 FTLAKGTGDSYQI---LLWLSGSTYRATGEQALLLSVGVVGLTLLALGLSRW-LTLISIG 543
            TL +   D  Q+   + W  G   R    +  +++  V  ++L+     RW    +  G
Sbjct: 182 -TLIQYFADDMQLAAMVYWSFGDLGRPLWPEVKIMAF-VAFVSLIYFIHKRWDYNALESG 239

Query: 544 RGFASARGLSASRASLVLLILVALLCALVTATMGPVSFVGLIAPHMAMMLGAQRAPSQLL 603
              A + G++  +  L  +++ +L+ ++  A +G + FVGLI PH+  +         + 
Sbjct: 240 EETAKSLGVNTDKIRLSGMLVASLVTSVCVAFLGIIGFVGLICPHIIRITVGGDYRYLIP 299

Query: 604 LAALVGGTLMLWADWLGQALLFPAQIAAGTLVAIIGGSYFLLLL 647
           L ++ G  L+L AD + + ++ P  +  G L + +G   FL LL
Sbjct: 300 LCSIFGAVLVLLADTIARTIISPIILPVGILTSFLGAPMFLYLL 343



 Score = 88.2 bits (217), Expect = 6e-22
 Identities = 85/324 (26%), Positives = 155/324 (47%), Gaps = 27/324 (8%)

Query: 14  LLLALVSLQWGH-NLTLNEQWQLVLGHQAAQSFAQVNFIYAQLPRAVMAIVVGAVLGLVG 72
           +++++ SL  G   L++++    +LG   A S   +  I  +LPR   AI+ G  L + G
Sbjct: 27  IIISIYSLCTGDFQLSISQIINSLLGSGDASSNLVIWNI--RLPRIFAAILCGIGLSVSG 84

Query: 73  SLMQQLTQNRLTSPLTLGTSSGAWLGLIIVNIWFSDWVAD----------YS-ALAAMAG 121
           ++MQ + +N L SP T+G S GA  G  +  I      A+          YS  + A  G
Sbjct: 85  AVMQCVLRNPLASPYTMGISHGAMFGACVAIITLGIGGAESTGHIAINNPYSITIFAFLG 144

Query: 122 ALLAFALIISIAGLRNLTGLPLVVSGMVVNILLGSIATALVLLNEEFAQNVFM-----WG 176
           +LL    ++ +A L+ L+   +V++G+ ++    S+ TA   L + FA ++ +     W 
Sbjct: 145 SLLGVCAVLILAKLKGLSPEAMVLAGVAIS----SLFTAATTLIQYFADDMQLAAMVYWS 200

Query: 177 AGDLAQNGWEWLTWLLPRLALVFPLLLFAPR-VLTLLRLGHEGAAARGLAVLPAFLFLMA 235
            GDL +  W  +  ++  +A V  +     R     L  G E A + G+      L  M 
Sbjct: 201 FGDLGRPLWPEVK-IMAFVAFVSLIYFIHKRWDYNALESGEETAKSLGVNTDKIRLSGML 259

Query: 236 GGIWLVSASITAVGVIGFIGLLTPNIARSLGARTTKMELYSSALLGALLLLATDMLAMGL 295
               + S  +  +G+IGF+GL+ P+I R       +  +   ++ GA+L+L  D +A   
Sbjct: 260 VASLVTSVCVAFLGIIGFVGLICPHIIRITVGGDYRYLIPLCSIFGAVLVLLADTIAR-- 317

Query: 296 SVWAEEVVPSGITAAVIGAPALIW 319
           ++ +  ++P GI  + +GAP  ++
Sbjct: 318 TIISPIILPVGILTSFLGAPMFLY 341