Pairwise Alignments

Query, 653 a.a., Fe(3+)-hydroxamate ABC transporter permease FhuB from Vibrio cholerae E7946 ATCC 55056

Subject, 316 a.a., iron ABC transporter permease from Methanococcus maripaludis S2

 Score =  112 bits (280), Expect = 2e-29
 Identities = 83/289 (28%), Positives = 143/289 (49%), Gaps = 19/289 (6%)

Query: 372 ALPSEFQWPLRWPRMLTALFAGVGLAIAGTLLQRLIYNPLASPDILGVSSGATFALVFAS 431
           +L +   + +R PR +    AG  LA+AG   Q +  N LA P+ILGV+SG+ F    A 
Sbjct: 35  SLANNIFFDIRLPRAIAVSLAGASLALAGVSFQNIFKNYLAGPNILGVTSGSAFGASIAI 94

Query: 432 LFLGQSLQSTHWMTALLGSAAVLVALLLLGRRHHYAPSSLILTGIAITALLEALVQFTLA 491
           LF   +     +   + G  AV +A  L           LIL+G+AI+A   A++   L 
Sbjct: 95  LFFAYNPYLVQFSAFIFGVIAVYIAYKLSSLLKS-GIVGLILSGMAISAFFSAMI--GLI 151

Query: 492 KGTGDSYQ----ILLWLSGS----TYRATGEQALLLSVGVVGLTLLALGLSRWL-TLISI 542
           K   D Y+    I+ WL GS     +   G   + + +G++GL +L     +W+  +++ 
Sbjct: 152 KYVADPYEKLPTIVFWLLGSFVGLRWVDLGISVIPMLIGIIGLVML-----KWVFNILAT 206

Query: 543 GRGFASARGLSASRASLVLLILVALLCALVTATMGPVSFVGLIAPHMAMMLGAQRAPSQL 602
           G   A + G+ + +   + + L  L  +  T+  G + +VG+++PH+A +L        +
Sbjct: 207 GDENAKSLGVDSKKLKNITIFLATLAASASTSLAGMIQWVGVVSPHIARLLVGVDNRKLV 266

Query: 603 LLAALVGGTLMLWADWLGQALLFPAQIAAGTLVAIIGGSYFLLLLLSQR 651
             +A VG TL+L  D L + L  P++I    + + IG    L+++LS+R
Sbjct: 267 PASAFVGATLLLLCDTLARTLT-PSEIPISIITSFIGAP-ILIIILSKR 313



 Score = 84.7 bits (208), Expect = 5e-21
 Identities = 78/285 (27%), Positives = 133/285 (46%), Gaps = 22/285 (7%)

Query: 44  SFAQVNFIYAQLPRAVMAIVVGAVLGLVGSLMQQLTQNRLTSPLTLGTSSGAWLGLIIVN 103
           S A   F   +LPRA+   + GA L L G   Q + +N L  P  LG +SG+  G  I  
Sbjct: 35  SLANNIFFDIRLPRAIAVSLAGASLALAGVSFQNIFKNYLAGPNILGVTSGSAFGASIAI 94

Query: 104 IWF--SDWVADYSALAAMAGALLAFALIISIAGLRNLTGLPLVVSGMVVNILLGSIATAL 161
           ++F  + ++  +SA       ++A  +   ++ L     + L++SGM ++    ++   +
Sbjct: 95  LFFAYNPYLVQFSAFIF---GVIAVYIAYKLSSLLKSGIVGLILSGMAISAFFSAMIGLI 151

Query: 162 VLLNEEFAQ--NVFMWGAGDLAQNGWEWL-TWLLPRLALVFPLLLFAPRVLTLLRLGHEG 218
             + + + +   +  W  G      W  L   ++P L  +  L++    V  +L  G E 
Sbjct: 152 KYVADPYEKLPTIVFWLLGSFVGLRWVDLGISVIPMLIGIIGLVML-KWVFNILATGDEN 210

Query: 219 AAARG-----LAVLPAFLFLMAGGIWLVSASITAVGVIGFIGLLTPNIARSLGARTTKME 273
           A + G     L  +  FL  +A      SAS +  G+I ++G+++P+IAR L     +  
Sbjct: 211 AKSLGVDSKKLKNITIFLATLA-----ASASTSLAGMIQWVGVVSPHIARLLVGVDNRKL 265

Query: 274 LYSSALLGALLLLATDMLAMGLSVWAEEVVPSGITAAVIGAPALI 318
           + +SA +GA LLL  D LA  L+      +P  I  + IGAP LI
Sbjct: 266 VPASAFVGATLLLLCDTLARTLT---PSEIPISIITSFIGAPILI 307