Pairwise Alignments

Query, 653 a.a., Fe(3+)-hydroxamate ABC transporter permease FhuB from Vibrio cholerae E7946 ATCC 55056

Subject, 348 a.a., iron ABC transporter permease from Methanococcus maripaludis JJ

 Score =  116 bits (290), Expect = 2e-30
 Identities = 79/284 (27%), Positives = 144/284 (50%), Gaps = 18/284 (6%)

Query: 379 WPLRWPRMLTALFAGVGLAIAGTLLQRLIYNPLASPDILGVSSGATFALVFASLFLG-QS 437
           W +R PR+  A+  G+GL+++G ++Q ++ NPLASP  +G+S GA F    A + LG   
Sbjct: 63  WNIRLPRIFAAILCGIGLSVSGAVMQCVLRNPLASPYTMGISHGAMFGACVAIITLGIGG 122

Query: 438 LQSTHWMT----------ALLGSAAVLVALLLLGRRHHYAPSSLILTGIAITALLEALVQ 487
            +ST  +           A LGS   + A+L+L +    +P +++L G+AI++L  A   
Sbjct: 123 AESTGHIAINNPYSITIFAFLGSLLGVCAVLVLAKLKGLSPEAMVLAGVAISSLFTAAT- 181

Query: 488 FTLAKGTGDSYQI---LLWLSGSTYRATGEQALLLSVGVVGLTLLALGLSRW-LTLISIG 543
            TL +   D  Q+   + W  G   R    +  ++++ V  ++L+     RW    +  G
Sbjct: 182 -TLIQYFADDMQLAAMVYWSFGDLGRPLWPEVKIMAL-VAFVSLIYFIHKRWDYNALESG 239

Query: 544 RGFASARGLSASRASLVLLILVALLCALVTATMGPVSFVGLIAPHMAMMLGAQRAPSQLL 603
              A + G++  +  L  +++ +L+ ++  A +G + FVGLI PH+  +         + 
Sbjct: 240 EETAKSLGVNTDKIRLSGMLVASLVTSVCVAFLGIIGFVGLICPHIIRITVGGDYRYLIP 299

Query: 604 LAALVGGTLMLWADWLGQALLFPAQIAAGTLVAIIGGSYFLLLL 647
           L ++ G  L+L AD + + ++ P  +  G L + +G   FL LL
Sbjct: 300 LCSIFGAVLVLLADTIARTIISPIILPVGILTSFLGAPMFLYLL 343



 Score = 88.2 bits (217), Expect = 6e-22
 Identities = 76/283 (26%), Positives = 135/283 (47%), Gaps = 24/283 (8%)

Query: 54  QLPRAVMAIVVGAVLGLVGSLMQQLTQNRLTSPLTLGTSSGAWLGLIIVNIWFSDWVAD- 112
           +LPR   AI+ G  L + G++MQ + +N L SP T+G S GA  G  +  I      A+ 
Sbjct: 66  RLPRIFAAILCGIGLSVSGAVMQCVLRNPLASPYTMGISHGAMFGACVAIITLGIGGAES 125

Query: 113 ---------YS-ALAAMAGALLAFALIISIAGLRNLTGLPLVVSGMVVNILLGSIATALV 162
                    YS  + A  G+LL    ++ +A L+ L+   +V++G+ ++    S+ TA  
Sbjct: 126 TGHIAINNPYSITIFAFLGSLLGVCAVLVLAKLKGLSPEAMVLAGVAIS----SLFTAAT 181

Query: 163 LLNEEFAQNVFM-----WGAGDLAQNGWEWLTWLLPRLALVFPLLLFAPR-VLTLLRLGH 216
            L + FA ++ +     W  GDL +  W  +  ++  +A V  +     R     L  G 
Sbjct: 182 TLIQYFADDMQLAAMVYWSFGDLGRPLWPEVK-IMALVAFVSLIYFIHKRWDYNALESGE 240

Query: 217 EGAAARGLAVLPAFLFLMAGGIWLVSASITAVGVIGFIGLLTPNIARSLGARTTKMELYS 276
           E A + G+      L  M     + S  +  +G+IGF+GL+ P+I R       +  +  
Sbjct: 241 ETAKSLGVNTDKIRLSGMLVASLVTSVCVAFLGIIGFVGLICPHIIRITVGGDYRYLIPL 300

Query: 277 SALLGALLLLATDMLAMGLSVWAEEVVPSGITAAVIGAPALIW 319
            ++ GA+L+L  D +A   ++ +  ++P GI  + +GAP  ++
Sbjct: 301 CSIFGAVLVLLADTIAR--TIISPIILPVGILTSFLGAPMFLY 341