Pairwise Alignments

Query, 653 a.a., Fe(3+)-hydroxamate ABC transporter permease FhuB from Vibrio cholerae E7946 ATCC 55056

Subject, 348 a.a., transport system permease protein (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  135 bits (339), Expect = 4e-36
 Identities = 90/274 (32%), Positives = 139/274 (50%), Gaps = 7/274 (2%)

Query: 379 WPLRWPRMLTALFAGVGLAIAGTLLQRLIYNPLASPDILGVSSGATFALVFASLFLGQSL 438
           W +R PR L A   G GLA+ G  LQ +  NPLA P +LG+SSGA F  + A L  G  L
Sbjct: 73  WEIRLPRALLAAMVGAGLALVGASLQSVTRNPLADPHLLGISSGAAFGAILALLHTGLFL 132

Query: 439 QSTHWMTALLGSAAVLVALLLLGRRHHYAPSS----LILTGIAITALLEALVQFTLAKGT 494
                   LL  A  L A LL+     +A ++    L+L G+A++ ++ +     +  G 
Sbjct: 133 GLL--TVPLLAFAGALAATLLVLGVTSFAQATGADRLVLAGVAVSFIVMSCANILIFIGD 190

Query: 495 GDS-YQILLWLSGSTYRATGEQALLLSVGVVGLTLLALGLSRWLTLISIGRGFASARGLS 553
             + + ++ W+ G    A  +Q L  +V +VG  L  L  +  L  ++IG   AS  G+ 
Sbjct: 191 PRATHTVVFWMLGGLGLAQWDQLLFPAVILVGCGLWFLANASRLNAMTIGDETASTLGIP 250

Query: 554 ASRASLVLLILVALLCALVTATMGPVSFVGLIAPHMAMMLGAQRAPSQLLLAALVGGTLM 613
            +R  L + ++ ALL   + A  G + FVGL+ PH+  ML        L  +ALVG   +
Sbjct: 251 IARFRLSVFVVGALLTGCMVAFSGIIGFVGLMIPHIVRMLVGGDYARVLPASALVGAIFL 310

Query: 614 LWADWLGQALLFPAQIAAGTLVAIIGGSYFLLLL 647
           +WAD   + ++ P  I  G +  +IGG++F+ LL
Sbjct: 311 VWADIAARTVMAPEDIPIGIVTGLIGGAFFVWLL 344



 Score =  128 bits (322), Expect = 4e-34
 Identities = 93/276 (33%), Positives = 141/276 (51%), Gaps = 9/276 (3%)

Query: 54  QLPRAVMAIVVGAVLGLVGSLMQQLTQNRLTSPLTLGTSSGAWLGLIIVNIWFSDWVADY 113
           +LPRA++A +VGA L LVG+ +Q +T+N L  P  LG SSGA  G I+  +    ++   
Sbjct: 76  RLPRALLAAMVGAGLALVGASLQSVTRNPLADPHLLGISSGAAFGAILALLHTGLFLGLL 135

Query: 114 SA-LAAMAGALLAFALIISIAGLRNLTGLP-LVVSGMVVNILLGSIATALVLLNEEFA-Q 170
           +  L A AGAL A  L++ +      TG   LV++G+ V+ ++ S A  L+ + +  A  
Sbjct: 136 TVPLLAFAGALAATLLVLGVTSFAQATGADRLVLAGVAVSFIVMSCANILIFIGDPRATH 195

Query: 171 NVFMWGAGDLAQNGWEWLTWLLPRLALVFPLLLFAPRV--LTLLRLGHEGAAARGLAVLP 228
            V  W  G L    W+ L  L P + LV   L F      L  + +G E A+  G+ +  
Sbjct: 196 TVVFWMLGGLGLAQWDQL--LFPAVILVGCGLWFLANASRLNAMTIGDETASTLGIPIAR 253

Query: 229 AFLFLMAGGIWLVSASITAVGVIGFIGLLTPNIARSLGARTTKMELYSSALLGALLLLAT 288
             L +   G  L    +   G+IGF+GL+ P+I R L        L +SAL+GA+ L+  
Sbjct: 254 FRLSVFVVGALLTGCMVAFSGIIGFVGLMIPHIVRMLVGGDYARVLPASALVGAIFLVWA 313

Query: 289 DMLAMGLSVWAEEVVPSGITAAVIGAPALIWFSRRQ 324
           D+ A   +V A E +P GI   +IG    +W  RR+
Sbjct: 314 DIAAR--TVMAPEDIPIGIVTGLIGGAFFVWLLRRR 347