Pairwise Alignments

Query, 653 a.a., Fe(3+)-hydroxamate ABC transporter permease FhuB from Vibrio cholerae E7946 ATCC 55056

Subject, 381 a.a., Vitamin B12 transporter, permease component (fecCD-like) (from data) from Shewanella sp. ANA-3

 Score =  142 bits (358), Expect = 3e-38
 Identities = 99/313 (31%), Positives = 155/313 (49%), Gaps = 28/313 (8%)

Query: 361 HIGWQMESASWALPSEFQWPLRWPRMLTALFAGVGLAIAGTLLQRLIYNPLASPDILGVS 420
           H+    E+ S ++       LR PR++ A  AG GL++AG++LQ +  NPLA P + G+S
Sbjct: 64  HLFMADEAVSTSMTERIVMELRLPRIILAFVAGAGLSLAGSVLQTVTRNPLADPYLFGIS 123

Query: 421 SGATF-ALVFASLFLGQSL-------------------QSTHWMTALLG-----SAAVLV 455
           SGA+F A+V  +LF G  L                       W +   G     S +VL+
Sbjct: 124 SGASFGAVVMLTLFTGSGLFGNAGTIANSGIFSGSGTFAGLLWFSLPFGAFIGASLSVLI 183

Query: 456 ALLLLGRRHHYAPSSLILTGIAITALLEALVQFTLAKGTGD-SYQILLWLSGSTYRATGE 514
            L L G         ++L+G+A + +  AL    L   +   +  +L W  GS  +A+  
Sbjct: 184 VLALAGLGLKSQVERMLLSGVATSFMFSALTSLLLYFASPQATASVLFWSLGSFAKASWS 243

Query: 515 QALLLSVGVVGLTLLALGLSRWLTLISIGRGFASARGLSASRASLVLLILVALLCALVTA 574
             +L S+ V+    + LG  R +  +  G   A   G++  +  L +L+L +L+ A++ A
Sbjct: 244 LLVLPSLVVLLSFFIILGWKRQIMALQAGDETAHTLGVNVPKLRLNMLLLCSLITAILVA 303

Query: 575 TMGPVSFVGLIAPHMAMMLGAQRAPSQLLLAALVGGTLMLWADWLGQALLFPAQIAAGTL 634
           T G + FVGL+ PH   +L   R P  +LL ALVGG  M+W D L + LL   ++  G +
Sbjct: 304 TCGGIGFVGLMIPHTVRLLFPGRQP--ILLTALVGGLFMVWIDVLARCLLGNQELPVGII 361

Query: 635 VAIIGGSYFLLLL 647
            A IG  +FLL+L
Sbjct: 362 TAAIGSFFFLLIL 374



 Score = 91.7 bits (226), Expect = 5e-23
 Identities = 89/354 (25%), Positives = 158/354 (44%), Gaps = 47/354 (13%)

Query: 6   LTGLGALTLLLALVSLQWGHNLTLNEQWQLVLGHQAAQ-SFAQVNFIYAQLPRAVMAIVV 64
           LT + A +   A +S      + +N+   L +  +A   S  +   +  +LPR ++A V 
Sbjct: 36  LTPIAAASFGAANISFLDVLQVFINKLSHLFMADEAVSTSMTERIVMELRLPRIILAFVA 95

Query: 65  GAVLGLVGSLMQQLTQNRLTSPLTLGTSSGAWLGLIIV---------------------- 102
           GA L L GS++Q +T+N L  P   G SSGA  G +++                      
Sbjct: 96  GAGLSLAGSVLQTVTRNPLADPYLFGISSGASFGAVVMLTLFTGSGLFGNAGTIANSGIF 155

Query: 103 --------NIWFSDWVADYSALAAMAGALLAFALIISIAGLRNLTGLP-LVVSGMVVNIL 153
                    +WFS          A  GA L+  +++++AGL   + +  +++SG+  + +
Sbjct: 156 SGSGTFAGLLWFS------LPFGAFIGASLSVLIVLALAGLGLKSQVERMLLSGVATSFM 209

Query: 154 LGSIATALV-LLNEEFAQNVFMWGAGDLAQNGWEWLTWLLPRLA--LVFPLLLFAPRVLT 210
             ++ + L+   + +   +V  W  G  A+  W  L  +LP L   L F ++L   R + 
Sbjct: 210 FSALTSLLLYFASPQATASVLFWSLGSFAKASWSLL--VLPSLVVLLSFFIILGWKRQIM 267

Query: 211 LLRLGHEGAAARGLAVLPAFLFLMAGGIWLVSASITAVGVIGFIGLLTPNIARSLGARTT 270
            L+ G E A   G+ V    L ++     + +  +   G IGF+GL+ P+  R L     
Sbjct: 268 ALQAGDETAHTLGVNVPKLRLNMLLLCSLITAILVATCGGIGFVGLMIPHTVRLL--FPG 325

Query: 271 KMELYSSALLGALLLLATDMLAMGLSVWAEEVVPSGITAAVIGAPALIWFSRRQ 324
           +  +  +AL+G L ++  D+LA  L     + +P GI  A IG+   +   RR+
Sbjct: 326 RQPILLTALVGGLFMVWIDVLARCL--LGNQELPVGIITAAIGSFFFLLILRRR 377