Pairwise Alignments

Query, 611 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 619 a.a., Multidrug resistance ABC transporter ATP-binding and permease protein from Pseudomonas fluorescens FW300-N2E2

 Score =  617 bits (1591), Expect = 0.0
 Identities = 319/609 (52%), Positives = 423/609 (69%), Gaps = 2/609 (0%)

Query: 3   MFQWFEKLTEPFPAQEPQTPPKSLVAFCRYYTQGFEKPLLLMSLLSACVAMAEVTLVRYM 62
           M + FE+  +PFP  E   PP+ L  F    T+G    +L  +LLSA V++ E  L  ++
Sbjct: 1   MLRVFEQRLDPFPPDEVPPPPEGLARFLWACTRGARGYILAFALLSAGVSIYEAWLFSFL 60

Query: 63  GEIVDILST-QERHQFWEMHGERLWTMAALVLVVMPILALVHSMLLHQTILGNYPMSIRW 121
           G++VD+LST Q   +     G  LW M  ++L  + ++AL  +M+ HQ +  N P+ +RW
Sbjct: 61  GQVVDLLSTWQAGGEAAAQEGRVLWGMGIVMLASIGLVAL-RTMVQHQVLAINLPLRLRW 119

Query: 122 STHRYLLKQSIGFFQRDFAGRVATKVMQNANSVRETVLKLVDLSVYIAVYMVSMLVMIAE 181
             HR +L+QS+ FF  +F+GRV TKVMQ A +VR+ +  L++++  I VY ++++ +   
Sbjct: 120 DFHRLMLRQSLSFFSDEFSGRVTTKVMQTALAVRDVLFTLIEIAPGIGVYFIAIIALAGG 179

Query: 182 ADKILVVPILVWLLFYIAIQVYFVPRLKTISTDQANAQSQMTGRIVDTYTNITTVKLFSH 241
               L++P L W++ +    +YFVPRL  +  +QA+A+S MTGRI D YTNITTVKLFSH
Sbjct: 180 FALKLMLPFLAWIVLFGLAMLYFVPRLGKVGQEQAHARSSMTGRISDAYTNITTVKLFSH 239

Query: 242 SQRETTYAKSGMKQFLHTVYRQMRTLTSLLYSVDLINYLLLFSIAALSIQLWLAETVTVG 301
           S RE  +A++ M+ F  T +RQMR ++        +   L+ +    ++ LW    V  G
Sbjct: 240 SNREAHFARAAMEDFKQTGFRQMRLVSQFEIVNQALVVGLIMAAGGYALWLWHQGEVGAG 299

Query: 302 VIAIGITIALRMQGMSKWIMWEIRALFESVGTVIDSMNTIANPVEIEDRPQAKSLQVKFG 361
            +A    +ALR+ GMS WIMW++ +LFES+GTV D M T+    +++D P A  L    G
Sbjct: 300 AVAAITAMALRINGMSHWIMWQMTSLFESIGTVQDGMATLTRGPKVQDAPDAGVLVTSGG 359

Query: 362 ELSFSQVRFGYSAQKTVFDDLNLVIQAGEKVGIVGRSGAGKSTLVNLLLRFYDVQSGQIR 421
            ++F  V F Y+ ++ V D L+L I+ GEK+G+VGRSGAGKSTL+NLLLRFYDV SGQIR
Sbjct: 360 AVTFDNVSFNYNGERQVLDGLSLNIRPGEKIGLVGRSGAGKSTLINLLLRFYDVDSGQIR 419

Query: 422 IDGQDISHVSQESLRRHIGMITQDTSLLHRSIRDNILYGNPDADQAAIEEAARQAHAHDF 481
           IDGQDI+HV+Q+SLR  IGM+TQDTSLLHRSI +NI YG PDA  A I  AA  A A +F
Sbjct: 420 IDGQDIAHVTQDSLRSAIGMVTQDTSLLHRSIGENIAYGRPDASDAQIRRAAANAQADEF 479

Query: 482 IQELQDEQGRTGYDVQVGERGVKLSGGQRQRIAIARVLLKNAPILIMDEATSALDSEVES 541
           I +L D QG TGYD  VGERG+KLSGGQRQRIAIARV+LKNAPIL++DEATSALDSEVE 
Sbjct: 480 ISQLSDRQGHTGYDTLVGERGIKLSGGQRQRIAIARVMLKNAPILLLDEATSALDSEVEV 539

Query: 542 AIQENLHTLMAGKTVIAIAHRLSTIAAMDRLIVMDEGKIVEQGTHQELLAHKGIYAQLWA 601
           AIQE+L  +M GKTVIAIAHRLSTIAAMDRLIVMD+G+I+EQGTH ELLA  GIYA+LW 
Sbjct: 540 AIQESLDEMMQGKTVIAIAHRLSTIAAMDRLIVMDDGRIIEQGTHAELLAKNGIYARLWQ 599

Query: 602 HQTGGFIGE 610
           HQ+GGF+GE
Sbjct: 600 HQSGGFLGE 608