Pairwise Alignments

Query, 611 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 617 a.a., ABC transporter, transmembrane region:ABC transporter from Pseudomonas syringae pv. syringae B728a

 Score =  610 bits (1574), Expect = e-179
 Identities = 317/615 (51%), Positives = 419/615 (68%), Gaps = 14/615 (2%)

Query: 3   MFQWFEKLTEPFPAQEPQTPPKSLVAFCRYYTQGFEKPLLLMSLLSACVAMAEVTLVRYM 62
           M + FEK  +PFP  E   PP  L  F    T+G    +L  +LL A V++ E  L  ++
Sbjct: 1   MLRAFEKWLDPFPPDEVPPPPDGLARFLWACTRGARGYILAFALLCAGVSIYEAWLFSFL 60

Query: 63  GEIVDILSTQERHQFWEMHGER-------LWTMAALVLVVMPILALVHSMLLHQTILGNY 115
           G++V++LST      W+  G+        LW +  LVL+   +L  + +M+ HQ +  N 
Sbjct: 61  GQVVELLST------WKAGGDTAAQESSVLWGIG-LVLLSSIVLVALRTMVQHQVLAINL 113

Query: 116 PMSIRWSTHRYLLKQSIGFFQRDFAGRVATKVMQNANSVRETVLKLVDLSVYIAVYMVSM 175
           P+ +RW  HR +L+QS+ FF  +F+GRV TKVMQ A SVRE +  +V++ + I VY +++
Sbjct: 114 PLRLRWDFHRLMLRQSLSFFSDEFSGRVTTKVMQTALSVREVLFTIVEIVLGIGVYFIAI 173

Query: 176 LVMIAEADKILVVPILVWLLFYIAIQVYFVPRLKTISTDQANAQSQMTGRIVDTYTNITT 235
           + +    D  L++P L WL+ +    +YFVPRL  +  +QANA+S MTGR+ D YTNITT
Sbjct: 174 IALAGGFDLKLMLPFLGWLMLFGLAMLYFVPRLGKVGQEQANARSSMTGRVSDAYTNITT 233

Query: 236 VKLFSHSQRETTYAKSGMKQFLHTVYRQMRTLTSLLYSVDLINYLLLFSIAALSIQLWLA 295
           VKLFSHS+RE  +A++ M+ F  T   QMR ++        +   L+ S    ++ LW  
Sbjct: 234 VKLFSHSKREAHFARAAMEDFKLTGLAQMRLVSQFEIVNQALVVALIMSAGGYALWLWHQ 293

Query: 296 ETVTVGVIAIGITIALRMQGMSKWIMWEIRALFESVGTVIDSMNTIANPVEIEDRPQAKS 355
             V  G +A    +ALR+ GMS WIMW++ +LFE++GTV D M T+    ++ED P AK+
Sbjct: 294 GQVGTGAVAAITAMALRINGMSHWIMWQMTSLFENIGTVQDGMETLTRGPKVEDAPDAKA 353

Query: 356 LQVKFGELSFSQVRFGYSAQKTVFDDLNLVIQAGEKVGIVGRSGAGKSTLVNLLLRFYDV 415
           L  + G ++F  V F Y+ ++ V D L+L I+ GEK+G+VGRSGAGKSTL+NLLLRFYDV
Sbjct: 354 LVTRGGAVTFDNVSFNYNGERQVLDALSLSIRPGEKIGLVGRSGAGKSTLINLLLRFYDV 413

Query: 416 QSGQIRIDGQDISHVSQESLRRHIGMITQDTSLLHRSIRDNILYGNPDADQAAIEEAARQ 475
             G I IDGQDI+HV+Q+SLR  IGM+TQDTSLLHRSIRDNI YG PDA    I  AA  
Sbjct: 414 DKGSISIDGQDIAHVTQDSLRSAIGMVTQDTSLLHRSIRDNIAYGRPDATDEQIRSAAAS 473

Query: 476 AHAHDFIQELQDEQGRTGYDVQVGERGVKLSGGQRQRIAIARVLLKNAPILIMDEATSAL 535
           A A  FI +L D+QG +GYD  VGERG+KLSGGQRQR+AIARV+LKNAPIL++DEATSAL
Sbjct: 474 AQADGFISQLSDKQGHSGYDTLVGERGIKLSGGQRQRVAIARVMLKNAPILLLDEATSAL 533

Query: 536 DSEVESAIQENLHTLMAGKTVIAIAHRLSTIAAMDRLIVMDEGKIVEQGTHQELLAHKGI 595
           DSEVE AIQE+L  +M GKTVIAIAHRLSTIAAMDRLIVMD+G+I+EQGTH ELL   G 
Sbjct: 534 DSEVEVAIQESLDEMMQGKTVIAIAHRLSTIAAMDRLIVMDDGRIIEQGTHAELLGKNGT 593

Query: 596 YAQLWAHQTGGFIGE 610
           YA+LW HQ+GGF+GE
Sbjct: 594 YARLWQHQSGGFLGE 608