Pairwise Alignments

Query, 611 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 612 a.a., ABC transporter, ATP-binding/permease protein, putative (RefSeq) from Shewanella amazonensis SB2B

 Score =  774 bits (1999), Expect = 0.0
 Identities = 380/607 (62%), Positives = 488/607 (80%)

Query: 3   MFQWFEKLTEPFPAQEPQTPPKSLVAFCRYYTQGFEKPLLLMSLLSACVAMAEVTLVRYM 62
           +FQ FE+ T   P  +   PP  L AFCR+YT+GFE PL+ MSLL+A +A  EV+L  +M
Sbjct: 4   LFQLFERWTPALPDTDATKPPSGLFAFCRHYTRGFEIPLISMSLLTALLAALEVSLFGFM 63

Query: 63  GEIVDILSTQERHQFWEMHGERLWTMAALVLVVMPILALVHSMLLHQTILGNYPMSIRWS 122
           G++VD L  ++     +  G+ L  M  LVLV +P+L L+H+++ +Q++LGNYPMSIRW 
Sbjct: 64  GQLVDWLVNKDPATLLQDEGKTLLGMTLLVLVAIPLLVLLHALIAYQSLLGNYPMSIRWL 123

Query: 123 THRYLLKQSIGFFQRDFAGRVATKVMQNANSVRETVLKLVDLSVYIAVYMVSMLVMIAEA 182
            HRYLLKQSIGF+Q +FAGR+ATKVMQ+A +VRETV+KL+D++VYI VY  SMLV+IA++
Sbjct: 124 AHRYLLKQSIGFYQNEFAGRIATKVMQSALAVRETVMKLLDVAVYILVYFTSMLVIIAQS 183

Query: 183 DKILVVPILVWLLFYIAIQVYFVPRLKTISTDQANAQSQMTGRIVDTYTNITTVKLFSHS 242
           D  L++P+LVWL FY+A+Q YF+PRLK +ST+QA+A+S MTGRIVD+YTNI+TVKLFSH+
Sbjct: 184 DWRLMMPMLVWLCFYVALQWYFIPRLKRVSTEQADARSTMTGRIVDSYTNISTVKLFSHT 243

Query: 243 QRETTYAKSGMKQFLHTVYRQMRTLTSLLYSVDLINYLLLFSIAALSIQLWLAETVTVGV 302
           QRE  YA+  M  FL TVYRQMR +T L  SV +INY+L+F++AA++I LW  + +T+G 
Sbjct: 244 QREADYARDAMGSFLDTVYRQMRLVTGLNVSVQVINYMLVFAVAAIAILLWTEQAITIGA 303

Query: 303 IAIGITIALRMQGMSKWIMWEIRALFESVGTVIDSMNTIANPVEIEDRPQAKSLQVKFGE 362
           IAI +++ALR+ GMS+WIMWE+ +LFE++GTV+D MNT++ P +IED P AK+LQV  G 
Sbjct: 304 IAIAVSLALRLNGMSQWIMWEVSSLFENIGTVVDGMNTLSKPTQIEDAPTAKALQVNNGA 363

Query: 363 LSFSQVRFGYSAQKTVFDDLNLVIQAGEKVGIVGRSGAGKSTLVNLLLRFYDVQSGQIRI 422
           + +  V F Y     V D L L I+ GEKVG+VGRSGAGKST+VNLL+RFYDV+ G+I I
Sbjct: 364 IHYKDVSFHYGEGSGVIDGLELNIRPGEKVGLVGRSGAGKSTMVNLLMRFYDVERGEILI 423

Query: 423 DGQDISHVSQESLRRHIGMITQDTSLLHRSIRDNILYGNPDADQAAIEEAARQAHAHDFI 482
           DGQ I+ V+Q+SLR HIGM+TQDTSLLHR+IR+NILYG PDA +  + +A  +A A +FI
Sbjct: 424 DGQPINEVTQDSLRAHIGMVTQDTSLLHRTIRENILYGRPDATEDELNKAIDRAQAREFI 483

Query: 483 QELQDEQGRTGYDVQVGERGVKLSGGQRQRIAIARVLLKNAPILIMDEATSALDSEVESA 542
           ++L D  G  G D  VGERGVKLSGGQRQRIAIARVLLK+APILI+DEATSALDSEVE+A
Sbjct: 484 EQLSDPSGNHGLDAMVGERGVKLSGGQRQRIAIARVLLKDAPILILDEATSALDSEVEAA 543

Query: 543 IQENLHTLMAGKTVIAIAHRLSTIAAMDRLIVMDEGKIVEQGTHQELLAHKGIYAQLWAH 602
           IQE+L+ LM GKTVIAIAHRLSTIAAMDRLIV+DEGK+VEQG+H+EL+AH GIYAQLWAH
Sbjct: 544 IQESLYQLMEGKTVIAIAHRLSTIAAMDRLIVLDEGKVVEQGSHKELVAHGGIYAQLWAH 603

Query: 603 QTGGFIG 609
           QTGGF+G
Sbjct: 604 QTGGFLG 610