Pairwise Alignments

Query, 611 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 617 a.a., ABC transporter, transmembrane region (NCBI) from Rhodospirillum rubrum S1H

 Score =  274 bits (701), Expect = 7e-78
 Identities = 159/425 (37%), Positives = 243/425 (57%), Gaps = 21/425 (4%)

Query: 185 ILVVPILVWLLFYIAIQVYFVPRLKTISTDQANAQSQMTGRIVDTYTNITTVKLFSHSQR 244
           ++V  + V++ + +AI  + +   ++++T  A A S    + +D+  N  TVK F + + 
Sbjct: 188 VMVGALAVYVAWTLAITEWRLDFRRSMNTHDAEASS----KAIDSLINYETVKYFGNEEH 243

Query: 245 ETTYAKSGMKQFLHTVYRQMRTLT------SLLYSVDLINYLLLFSIAALSIQLWLAETV 298
           E       +  +     +  R+L+      S + S+ L+  +++ ++     ++   + V
Sbjct: 244 EAKRFDRALSAYEEVAVKSHRSLSLLNVGQSAIISLSLVAVMIMAAVDIRGGRMTPGDFV 303

Query: 299 TVGVIAIGITIALRMQGMSKWIMWEIRALFESVGTVIDSMNTIANPVEIEDRPQAKSLQV 358
            V    + + + L   GM        R + + +  +      I  P E+ D   A  L V
Sbjct: 304 LVNTYLLQLYVPLNFLGMV------YREVKQGLVDMEVLFGLIDRPPEVADPANAADLVV 357

Query: 359 KFGELSFSQVRFGYSAQKTVFDDLNLVIQAGEKVGIVGRSGAGKSTLVNLLLRFYDVQSG 418
           + G + F  VRF Y+ ++ V   ++L I AG  + +VG SGAGKSTL  LL RFYDV  G
Sbjct: 358 RGGAVRFEGVRFAYNPEREVLKGVSLEIPAGGTLAVVGHSGAGKSTLSRLLFRFYDVTGG 417

Query: 419 QIRIDGQDISHVSQESLRRHIGMITQDTSLLHRSIRDNILYGNPDADQAAIEEAARQAHA 478
           ++ IDGQD+  V+Q SLRR IG++ QDT L + +I  NI YG P A +  +E AAR A  
Sbjct: 418 RVLIDGQDLRDVTQASLRRAIGIVPQDTVLFNDTIGYNIAYGRPGASRQEVERAARLAAI 477

Query: 479 HDFIQELQDEQGRTGYDVQVGERGVKLSGGQRQRIAIARVLLKNAPILIMDEATSALDSE 538
           HDF+Q L++     GYD QVGERG+KLSGG++QR+AIAR +LK+  ILI+DEATSALDS 
Sbjct: 478 HDFVQSLKN-----GYDTQVGERGLKLSGGEKQRVAIARTILKDPAILILDEATSALDSH 532

Query: 539 VESAIQENLHTLMAGKTVIAIAHRLSTIAAMDRLIVMDEGKIVEQGTHQELLAHKGIYAQ 598
            E  IQ  L  +  G+T + IAHRLST+   DR++V+D G++ E G+H +LL  +G+YA 
Sbjct: 533 TEREIQGALRDVSRGRTTLVIAHRLSTVIDADRILVLDGGRVAESGSHDDLLRAEGLYAA 592

Query: 599 LWAHQ 603
           LW  Q
Sbjct: 593 LWRKQ 597