Pairwise Alignments

Query, 611 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 620 a.a., lipid ABC transporter ATPase/inner membrane protein (RefSeq) from Shewanella loihica PV-4

 Score =  258 bits (658), Expect = 7e-73
 Identities = 169/548 (30%), Positives = 284/548 (51%), Gaps = 40/548 (7%)

Query: 77  FWEMHGERLWTMAALVLVVMPILALVHSMLLHQTILGNY-----PMSIRWSTHRYLLKQS 131
           F   +GERL     ++L+V+ I AL  S +  +  L  +        IR   + +LLK S
Sbjct: 76  FLRENGERL---NEIILLVIGITALSSSAIFCRFYLMTWLGERVSADIRLKVYDHLLKLS 132

Query: 132 IGFFQRDFAGRVATKVMQNANSVRETVLKLVDLSVYIAVYMVSMLVMIAEADKILVVPIL 191
            GF+ R   G V ++   +A  ++  V   + +++  +V +V  LVM+A     L   +L
Sbjct: 133 PGFYARLRTGEVISRFTADATLLQSVVGSSLSMALRASVTVVGGLVMMAITSLKLTALVL 192

Query: 192 VWLLFYIAIQVYFVPRLKTISTDQANAQSQMTGRIVDTYTNITTVKLFSHSQRETTYAKS 251
           + +   +    +F  +++ +S    +    +   + ++   I TV+ + H  R+      
Sbjct: 193 LAVPLVLGPIFFFGRKVRELSRKSQDRVGDLGAYVDESLHEIHTVQAYCHEDRDRQLFSE 252

Query: 252 GMKQFLHTVYRQMRTLTSLLYSVDLINYLLLFSIAALSIQLW------LAETVTVGVIAI 305
            ++  +     +++      Y   LI+ ++  SI A+++  W      ++E +T G ++ 
Sbjct: 253 RVEAVMEAARGRIK------YRAILISLVMFLSILAIALITWVGAKDVMSEAITPGELSA 306

Query: 306 GITIALRMQGMSKWIMWEIRALFESVGTVIDSMNTIANPVEIEDRPQAKSLQVKF-GELS 364
            +  A+ + G    I   I  +  + G     +  +  P++I   P+  SL  K  GELS
Sbjct: 307 FMFYAVMVAGAVATISEVIGEIQRAAGATERLIELVETPIDIPLAPKPVSLPAKVRGELS 366

Query: 365 FSQVRFGYSAQKT--------------VFDDLNLVIQAGEKVGIVGRSGAGKSTLVNLLL 410
             QVRF Y  Q +              V   L+L I  GE+V +VG SGAGKSTL  LL 
Sbjct: 367 LEQVRFSYPVQASADSAEEMEAQAGVEVIRGLSLHIAPGERVALVGASGAGKSTLFELLQ 426

Query: 411 RFYDVQSGQIRIDGQDISHVSQESLRRHIGMITQDTSLLHRSIRDNILYGNPDADQAAIE 470
           RFY + SG I +DG DI+ +  + LR+   ++ Q++ +   S+ +N+ YG PDA    ++
Sbjct: 427 RFYVLDSGVIALDGIDIASLRPQDLRQQYALVPQESVIFATSVLENVRYGRPDASLEEVQ 486

Query: 471 EAARQAHAHDFIQELQDEQGRTGYDVQVGERGVKLSGGQRQRIAIARVLLKNAPILIMDE 530
            A   A A +FI +  +     GY   +GERGV+LSGGQ+QRIAIAR +L + P+L++DE
Sbjct: 487 AACVAARADEFIADFSE-----GYQTYLGERGVRLSGGQKQRIAIARAILADRPVLLLDE 541

Query: 531 ATSALDSEVESAIQENLHTLMAGKTVIAIAHRLSTIAAMDRLIVMDEGKIVEQGTHQELL 590
           ATSALD+  E  +++ L  LM G+T + IAHRL+T+   DR++VMD+G+++  GTH EL+
Sbjct: 542 ATSALDAVSEQKVKQALDVLMQGRTTLIIAHRLATVLNADRILVMDKGELIASGTHGELM 601

Query: 591 AHKGIYAQ 598
               +Y +
Sbjct: 602 QSNSLYRE 609