Pairwise Alignments

Query, 611 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 609 a.a., ABC transporter-related protein (RefSeq) from Shewanella loihica PV-4

 Score =  773 bits (1997), Expect = 0.0
 Identities = 379/607 (62%), Positives = 483/607 (79%)

Query: 3   MFQWFEKLTEPFPAQEPQTPPKSLVAFCRYYTQGFEKPLLLMSLLSACVAMAEVTLVRYM 62
           MF+ FE      P QE   PP+ +  FCR+YT+GFE PL LMS+L+A +A+ EV+L  +M
Sbjct: 1   MFKRFESWVSALPDQEAVQPPRGIYRFCRHYTRGFELPLALMSILTALLAILEVSLFAFM 60

Query: 63  GEIVDILSTQERHQFWEMHGERLWTMAALVLVVMPILALVHSMLLHQTILGNYPMSIRWS 122
           G++VD+L++      +   G++L  MA LVLVV+P+L L+H+++++Q +LGNYPMSIRW 
Sbjct: 61  GDLVDLLASHSPETLFAEQGDKLLLMAVLVLVVIPVLVLLHALVIYQGLLGNYPMSIRWL 120

Query: 123 THRYLLKQSIGFFQRDFAGRVATKVMQNANSVRETVLKLVDLSVYIAVYMVSMLVMIAEA 182
            HRYLLKQSI F+Q DFAGR+ATKVMQ + +VRETV KL+D+ VYI VY +SMLV+IA+A
Sbjct: 121 AHRYLLKQSIAFYQNDFAGRIATKVMQTSLAVRETVTKLLDVLVYILVYFLSMLVIIADA 180

Query: 183 DKILVVPILVWLLFYIAIQVYFVPRLKTISTDQANAQSQMTGRIVDTYTNITTVKLFSHS 242
           D  L++P+LVWL+ Y+ +Q Y++P+LK +ST+QA+A+S MTGRIVD+YTNI TVKLFSH+
Sbjct: 181 DLRLMLPMLVWLMIYVGLQFYYLPKLKQVSTEQADARSTMTGRIVDSYTNIATVKLFSHT 240

Query: 243 QRETTYAKSGMKQFLHTVYRQMRTLTSLLYSVDLINYLLLFSIAALSIQLWLAETVTVGV 302
           Q+E  YAK  M  FL TVYRQMR +T +  SV +INYLL FS+AA+SI LW    +T+G 
Sbjct: 241 QKEAQYAKESMTGFLDTVYRQMRLVTGINVSVQVINYLLAFSVAAVSIWLWRDNAITIGA 300

Query: 303 IAIGITIALRMQGMSKWIMWEIRALFESVGTVIDSMNTIANPVEIEDRPQAKSLQVKFGE 362
           IA+ ++++LR+ GMS+WIMWEI +LFE++GTV D MNT++ P  ++D   A  L V  GE
Sbjct: 301 IAVAVSLSLRLNGMSQWIMWEISSLFENIGTVADGMNTLSRPTSVQDSDNASQLTVSKGE 360

Query: 363 LSFSQVRFGYSAQKTVFDDLNLVIQAGEKVGIVGRSGAGKSTLVNLLLRFYDVQSGQIRI 422
           ++F++V F Y     V +DL+L I+ GEKVG+VGRSGAGKSTLVNLL+RF+DV+ G I I
Sbjct: 361 IAFNRVSFHYGEASGVIEDLDLKIKPGEKVGLVGRSGAGKSTLVNLLMRFHDVEQGSITI 420

Query: 423 DGQDISHVSQESLRRHIGMITQDTSLLHRSIRDNILYGNPDADQAAIEEAARQAHAHDFI 482
           DGQ+I  V Q+SLR +IGM+TQDTSLLHRSIRDNI YG PDA +  +E A RQA A++FI
Sbjct: 421 DGQNIREVEQDSLRANIGMVTQDTSLLHRSIRDNIRYGKPDASEEELENAIRQAQAYEFI 480

Query: 483 QELQDEQGRTGYDVQVGERGVKLSGGQRQRIAIARVLLKNAPILIMDEATSALDSEVESA 542
           Q L D +G  G D QVGERGVKLSGGQRQRIAIARVLLKNAPIL++DEATSALDSE+E+A
Sbjct: 481 QGLSDPEGNHGLDAQVGERGVKLSGGQRQRIAIARVLLKNAPILLLDEATSALDSEIEAA 540

Query: 543 IQENLHTLMAGKTVIAIAHRLSTIAAMDRLIVMDEGKIVEQGTHQELLAHKGIYAQLWAH 602
           IQE+L+ LM GKTVIAIAHRLSTIAAMDRLIV+D+GKIVEQGTHQEL+   GIYAQLWAH
Sbjct: 541 IQESLYQLMEGKTVIAIAHRLSTIAAMDRLIVLDQGKIVEQGTHQELIKQGGIYAQLWAH 600

Query: 603 QTGGFIG 609
           QTGGF+G
Sbjct: 601 QTGGFLG 607