Pairwise Alignments

Query, 611 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 556 a.a., lipid A ABC transporter ATPase/inner membrane protein from Marinobacter adhaerens HP15

 Score =  240 bits (612), Expect = 1e-67
 Identities = 150/487 (30%), Positives = 260/487 (53%), Gaps = 15/487 (3%)

Query: 119 IRWSTHRYLLKQSIGFFQRDFAGRVATKVMQNANSVRETVLKLVDLSVYIAVYMVSMLVM 178
           IR     +L+    GFF+++ A  + ++   +   ++  +   V +++  A+ +V     
Sbjct: 69  IRKKVFNHLIDLHPGFFEQNRALEIQSRFTADTTVLQSVIGSTVSIALRNALMLVGGCCC 128

Query: 179 IAEADKILVVPILVWLLFYIAIQVYFVPRLKTISTDQANAQSQMTGRIVDTYTNITTVKL 238
            +         +  W   +IA  +++  R++ +S    +  + +   + +  T I TV+ 
Sbjct: 129 CSSPTPNWRA-LFCWAFPWIAPILFYGRRVRALSRLSQDRVADVGSYVGENLTQIKTVQA 187

Query: 239 FSHSQRETTYAKSGMKQFLHTVYRQMRT---LTSLLYSVDLINYLLLFSIAALSIQLWLA 295
           F+H   +  Y     ++      +++R    LT+L  S+ +    ++  I  L +   + 
Sbjct: 188 FNHQPHDRKYFSEVSERAFEIARQRIRQRAWLTTLAISLVMGAVGIVIWIGGLDV---IH 244

Query: 296 ETVTVGVIAIGITIALRMQGMSKWIMWEIRALFESVGTVIDSMNTIANPVEIEDRPQAKS 355
             ++ G +A  +  +L +   +  I   I  L  + G+       +      E +   ++
Sbjct: 245 GRISPGELAAFVFYSLLVGVAAGAISEVIGELQRAAGSAARLFELLQTEPAFERKASTQT 304

Query: 356 LQVKF-GELSFSQVRFGYSA--QKTVFDDLNLVIQAGEKVGIVGRSGAGKSTLVNLLLRF 412
           L     G +   ++ F Y    ++    DL+L ++AGE + +VG SGAGKSTL +LLL F
Sbjct: 305 LPEHVQGAIRIERLSFSYPGRLEQPALTDLSLEVRAGETLALVGPSGAGKSTLFDLLLHF 364

Query: 413 YDVQSGQIRIDGQDISHVSQESLRRHIGMITQDTSLLHRSIRDNILYGNPDADQAAIEEA 472
           Y    G+I +DG D + +S ++LRR   ++ Q+ +L H ++ DNI Y  PDA Q  +E+A
Sbjct: 365 YQPTEGRILLDGVDTADLSLDALRRCFSLVPQNPALFHGTVADNIRYARPDASQQDVEQA 424

Query: 473 ARQAHAHDFIQELQDEQGRTGYDVQVGERGVKLSGGQRQRIAIARVLLKNAPILIMDEAT 532
           A+ AHAHDFIQ L       GY   +G+ G+ LSGGQ+QR+AIAR LL +AP+L++DEAT
Sbjct: 425 AKVAHAHDFIQSLPK-----GYGTPLGDAGLGLSGGQKQRLAIARALLADAPVLLLDEAT 479

Query: 533 SALDSEVESAIQENLHTLMAGKTVIAIAHRLSTIAAMDRLIVMDEGKIVEQGTHQELLAH 592
           SALD+E E+ IQ+ +  L AG+T + IAHRL+T+   DR+ VMD+G+++  GTH EL+ H
Sbjct: 480 SALDAESENLIQQAMPALTAGRTTLVIAHRLATVRDADRIAVMDQGRLLAVGTHDELMRH 539

Query: 593 KGIYAQL 599
             +Y +L
Sbjct: 540 NALYQRL 546