Pairwise Alignments

Query, 611 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 595 a.a., ABC transporter, ATP-binding/permease protein, putative (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  253 bits (647), Expect = 1e-71
 Identities = 167/532 (31%), Positives = 279/532 (52%), Gaps = 21/532 (3%)

Query: 77  FWEMHGERLWTMAALVLVVMPILAL-VHSMLLHQTILGN-YPMSIRWSTHRYLLKQSIGF 134
           F + + +RL  +   VLV+  +    V       T LG      IR + +  LLK S  F
Sbjct: 59  FIKDNAQRLNEIILFVLVITAVSGTAVFCRFYLMTWLGERVSADIRLAVYNQLLKLSPAF 118

Query: 135 FQRDFAGRVATKVMQNANSVRETVLKLVDLSVYIAVYMVSMLVMIAEADKILVVPILVWL 194
           + +   G V ++   ++  ++  V   + +++   V ++  L M+      + + +L+ +
Sbjct: 119 YAKVRTGEVISRFTADSTLLQTVVGSSLSMALRSGVTVIGGLAMMGITSVKMTLLVLLAV 178

Query: 195 LFYIAIQVYFVPRLKTISTDQANAQSQMTGRIVDTYTNITTVKLFSHSQRETTYAKSGMK 254
              +    +F  +++T++ +  +  + +   + +T   I TV+ + H  ++ +     ++
Sbjct: 179 PLVLGPVSFFGRKVRTLARESQDRVADLGAYVDETLHEIHTVQAYGHEDKDRSLFNGRVE 238

Query: 255 QFLHTVYRQMRTLTSLLYSVDLINYLLLFSIAALSIQLW------LAETVTVGVIAIGIT 308
             +     ++R      Y   LI+ ++  SIAA+++  W      ++  +T G ++  + 
Sbjct: 239 DVMTAASGRIR------YRALLISSVMFLSIAAIALVTWVGAHDVMSGKMTGGELSAFMF 292

Query: 309 IALRMQGMSKWIMWEIRALFESVGTVIDSMNTIANPVEIEDRPQAKSLQVKF-GELSFSQ 367
            A+ + G    I   +  +  + G     +      V+I      K+L  K  GEL   Q
Sbjct: 293 YAVMVAGAVATISEVVGEIQRASGAAERLIELAETEVDIPAPLVPKTLPTKVRGELQLHQ 352

Query: 368 VRFGYSAQ-KTVFDDLNLVIQAGEKVGIVGRSGAGKSTLVNLLLRFYDVQSGQIRIDGQD 426
           + F Y  Q + V  DLNLVI AGE+V +VG SGAGKSTL  LL RFY   SG I +DG D
Sbjct: 353 LNFHYPEQTQLVLSDLNLVINAGERVALVGPSGAGKSTLFQLLQRFYVPSSGSILLDGID 412

Query: 427 ISHVSQESLRRHIGMITQDTSLLHRSIRDNILYGNPDADQAAIEEAARQAHAHDFIQELQ 486
           I+ +S + LR    ++ QD+ +   S+ +N+ YG  DA +  + +A   A AH+FI E  
Sbjct: 413 IAALSPQDLRAQFALVPQDSVIFATSVLENVRYGRVDASEQEVIDACIAARAHEFISEFS 472

Query: 487 DEQGRTGYDVQVGERGVKLSGGQRQRIAIARVLLKNAPILIMDEATSALDSEVESAIQEN 546
           +     GY   +GERGV+LSGGQ+QRIAIAR +L + PIL++DEATSALD+  E  +++ 
Sbjct: 473 E-----GYQTYLGERGVRLSGGQKQRIAIARAILADRPILLLDEATSALDALSEQKVKQA 527

Query: 547 LHTLMAGKTVIAIAHRLSTIAAMDRLIVMDEGKIVEQGTHQELLAHKGIYAQ 598
           L  LMAGKT + IAHRL+T+   DR+IV D+G+IV  G HQ+L+    +Y +
Sbjct: 528 LDELMAGKTTLIIAHRLATVINADRIIVFDKGRIVASGKHQDLIKTNALYRE 579