Pairwise Alignments

Query, 611 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 607 a.a., phospholipid-lipopolysaccharide ABC transporter from Caulobacter crescentus NA1000

 Score =  254 bits (648), Expect = 1e-71
 Identities = 190/606 (31%), Positives = 304/606 (50%), Gaps = 49/606 (8%)

Query: 19  PQTPPKSLVA-FCRYYTQGFEKPLLLMSLLSACVAMAEVTLVRYMGEIVDILSTQERHQF 77
           PQ   ++L+    R + Q   K  L+  + +  VA   V L  Y+   VD L    +   
Sbjct: 7   PQPSNRALMGRMWREFLQPRWKGFLVSMISAVIVARLTVMLGEYVEPAVDKLIAHPQP-- 64

Query: 78  WEMHGERLW---TMAALVLVVMPILALVHSMLLHQTILGNYPMS-IRWSTHRYLLKQSIG 133
               G  +W   T+AAL  V   +  ++ + L+++  +GN  +  ++      L++  + 
Sbjct: 65  ----GALIWVPLTIAALA-VGRGVFQVIQASLINR--IGNGVVGDMQTRLFGRLIRADLA 117

Query: 134 FFQRDFAGRVATKVMQNANSVRETVLKLVDLSVYIAVYMVSMLVMIAEADKILVVPILVW 193
             +   +G     V+ +A  +RE     V   V  A+ +   L  +  +D IL   +L+ 
Sbjct: 118 RLRGAHSGSYVASVLYDAGLIREAATTGVVNYVREALIVAITLWALFNSDPILAAGVLII 177

Query: 194 LLFYIAIQVYFVPRLKTISTDQANAQSQMTGRIVDTYTNITTVKLFSHSQRETTYAKSGM 253
           +     +  +F  R    +       S ++  I+++   +  VK+ +    E     + +
Sbjct: 178 VPGVSGVIRHFAKRTTKAAKGAMGETSNLSTAIMESLDGVKIVKMENREAYEEARVAAVV 237

Query: 254 KQFLHTVYRQMRTLTSLLYSVDLINYLLLFSIAALSIQLWLAETVTVG------------ 301
           ++    + +          + +L + L++ ++ A +    +   + VG            
Sbjct: 238 ERRQRHLIKGSNARAMAAPATELFSQLVIAAVFAYAGWRAITGALVVGPFTLPPITPGGF 297

Query: 302 ---VIAIGITI-ALRMQGMSKWIMWE----IRALFESVGTVIDSMNTIANPVEIEDRPQA 353
              VI +GI   +LR     + +  E     R LFE+    +D   TI +P + +  P  
Sbjct: 298 LKFVILLGIAAQSLRQVANLQTVFSEGLTAARRLFEA----LDVAPTIVDPADAKALPPG 353

Query: 354 KSLQVKFGELSFSQVRFGYSAQKTVFDDLNLVIQAGEKVGIVGRSGAGKSTLVNLLLRFY 413
           +S+      ++ + V F Y A       +NL  + GE V +VG SG GKS+++NL+ RFY
Sbjct: 354 ESM------IALADVTFSYGADIPALSSVNLQARKGETVALVGPSGGGKSSILNLIPRFY 407

Query: 414 DVQSGQIRIDGQDISHVSQESLRRHIGMITQDTSLLHRSIRDNILYGNPDADQAAIEEAA 473
           DV +G + IDG D+  V+  SLR  I ++TQ+  L   +IR NI Y  P A Q  IE A+
Sbjct: 408 DVNAGAVTIDGHDVRSVTIASLRDRIALVTQEPFLFDDTIRANIAYARPGASQLEIEAAS 467

Query: 474 RQAHAHDFIQELQDEQGRTGYDVQVGERGVKLSGGQRQRIAIARVLLKNAPILIMDEATS 533
           RQA AH+FIQ L +     GYD  VGE G +LSGGQRQRIAIAR  LK+APIL++DEATS
Sbjct: 468 RQAAAHEFIQALPE-----GYDTAVGEGGARLSGGQRQRIAIARAFLKDAPILLLDEATS 522

Query: 534 ALDSEVESAIQENLHTLMAGKTVIAIAHRLSTIAAMDRLIVMDEGKIVEQGTHQELLAHK 593
           ALD+E E+ +Q  L  LMAG+T I IAHRLST+   DR+ V+D+G++VE G+H EL+   
Sbjct: 523 ALDTESEAQVQAALERLMAGRTTILIAHRLSTVKNADRIYVIDKGRVVETGSHAELVRAG 582

Query: 594 GIYAQL 599
           G+YA+L
Sbjct: 583 GLYARL 588