Pairwise Alignments

Query, 611 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 576 a.a., ABC transporter ATP-binding/transmembrane protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  250 bits (638), Expect = 1e-70
 Identities = 169/531 (31%), Positives = 270/531 (50%), Gaps = 21/531 (3%)

Query: 84  RLWTMAALVLVVMPILALVHSMLLHQTILGNYPMSI--RWSTHRYLLKQSIGFFQRDFAG 141
           RLW + A+++V M ++A            G Y MS   R +   +L K S+GF  R   G
Sbjct: 58  RLWMIFAILVVYMVVMAFAERAAYRANFRGAYEMSAEGRINLAEHLRKLSLGFLSRRDPG 117

Query: 142 RVATKVMQNANSVRETVLKLVDLSVYIAVYMVSMLVMIAEADKILVVPILVWLLFYIAIQ 201
            +++ ++ +       +   +   +   V  V   + +   D  + V + V L   +A+ 
Sbjct: 118 DLSSMLITDFTMAETGISHHLPQLMGALVMPVFAFLGLLWIDWRMAVAMFVALPLAVAVL 177

Query: 202 VYFVPRLKTISTDQANAQSQMTGRIVDTYTNITTVKLFSHSQRETTYAKSGMKQFLHTVY 261
           +      + +S  Q  A+     R+ +    I  +K ++    +    K           
Sbjct: 178 LLSNIAQRKLSVRQIEAKINAGNRLEEYLQGIRVMKAYNLLGGKFERLKMAFSDLRRACI 237

Query: 262 RQMRTLTS-LLYSVDLINYLLLFSIAALSIQLWLAETVTVGVIAIGITIALRMQGMSKWI 320
           RQ   L   +L+SV LI   L F I   +  L   E   +  +   +  +     ++  +
Sbjct: 238 RQEALLGPFILFSVTLIRAGLTFMILCGTYLLIGGELSLLTFVMFLVVGSRVFDPLTSAL 297

Query: 321 --MWEIRALFESVGTVIDSMNTIANPVEIEDRPQAKSLQVKFGELSFSQVRFGYSAQKTV 378
               E R    + G ++  MN    P    DR   +S     G+++F  V FGY  +K +
Sbjct: 298 TNFAEFRYFSIAGGRILTLMN---EPEMKGDRDVPES-----GDITFDHVSFGYQ-EKEI 348

Query: 379 FDDLNLVIQAGEKVGIVGRSGAGKSTLVNLLLRFYDVQSGQIRIDGQDISHVSQESLRRH 438
             D+++ ++ G    +VG SG+GKST++ L  RFYD + G +R +G D+  +  ESL +H
Sbjct: 349 LHDISVTLRKGTLTALVGPSGSGKSTMLKLCARFYDPRKGSVRFNGMDMKELEPESLMKH 408

Query: 439 IGMITQDTSLLHRSIRDNILYGNPDADQAAIEEAARQAHAHDFIQELQDEQGRTGYDVQV 498
             M+ QD  L   ++++NI +G  DA    I  AA++A  H+FI  L       GYD  V
Sbjct: 409 CSMVFQDVYLFQDTLKNNIRFGRTDATDEEIVAAAKKACCHEFIMRLPK-----GYDTMV 463

Query: 499 GERGVKLSGGQRQRIAIARVLLKNAPILIMDEATSALDSEVESAIQENLHTLMAGKTVIA 558
           GE G  LSGG++QRI+IAR +LK AP++++DEAT++LD E E  +Q+ ++TL+AG+TVI 
Sbjct: 464 GEGGCTLSGGEKQRISIARAMLKEAPVVLLDEATASLDPENEVEVQQAINTLIAGRTVIV 523

Query: 559 IAHRLSTIAAMDRLIVMDEGKIVEQGTHQELLAHKGIYAQLW--AHQTGGF 607
           IAHRL TI   DR+IV++EG+I EQGTH ELL+  G+YA+LW    QT G+
Sbjct: 524 IAHRLKTIRNADRIIVLEEGRIAEQGTHDELLSRPGLYAKLWNIQEQTSGW 574