Pairwise Alignments

Query, 611 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 598 a.a., ABC transporter related (RefSeq) from Shewanella sp. ANA-3

 Score =  265 bits (678), Expect = 3e-75
 Identities = 160/449 (35%), Positives = 253/449 (56%), Gaps = 25/449 (5%)

Query: 161 LVDLSVYIAVYMVSMLVMIAEADKILVVPILVWLLFYIAIQVYFVPRLKTISTDQANAQS 220
           L+++++ I ++  +  +  A    I    ++ ++ F +    +    ++    D A A S
Sbjct: 159 LLEIAMVIGIFFFNYGIAFAA---ITFTSVMAYIWFSVVATEWRTEYVR----DAAKADS 211

Query: 221 QMTGRIVDTYTNITTVKLFSHSQRETTYAKSGMKQFLHTVYRQMRTLTSLLYSVDLINYL 280
               R +D+  N  TVK F++ + E+      + Q+     +   +L +L     LI  L
Sbjct: 212 LSNTRAIDSLLNYETVKYFNNEKYESDRYDQALDQWEVAKRKNRLSLFALNGGQALIIAL 271

Query: 281 LLFSIAALSI------QLWLAETVTVGVIAIGITIALRMQGMSKWIMWEIRALFESVGTV 334
            + ++ AL+       ++ L + V +    + + + L   G   ++  EIR    ++  +
Sbjct: 272 AMTAMMALAAYKVTNNEMTLGDFVLINAFMMQLFMPLNFLG---FVYREIRGALANIERM 328

Query: 335 IDSMNTIANPVEIEDRPQAKSLQVKFGELSFSQVRFGYSAQKTVFDDLNLVIQAGEKVGI 394
              ++   +P  I D+P A   + K GELSF  V F Y   + +  +++  + AG+KV +
Sbjct: 329 FSLLDK--HP-RIVDKPDAFDFEPKRGELSFEHVSFSYD-DRPILRNVSFKVTAGKKVAV 384

Query: 395 VGRSGAGKSTLVNLLLRFYDVQSGQIRIDGQDISHVSQESLRRHIGMITQDTSLLHRSIR 454
           VG SGAGKSTL+ LL RFYDV+ G+I IDGQDI  ++Q++LRR I ++ QDT L + S+ 
Sbjct: 385 VGDSGAGKSTLIKLLFRFYDVEQGRILIDGQDIRQLTQDALRRAIAIVPQDTVLFNDSLV 444

Query: 455 DNILYGNPDADQAAIEEAARQAHAHDFIQELQDEQGRTGYDVQVGERGVKLSGGQRQRIA 514
           +NI YG PDA    +  A + AH   FI  L       G+D +VGERG+KLSGG++QR+A
Sbjct: 445 ENIRYGRPDATDEEVRHAIKLAHLEHFIASLSQ-----GWDTKVGERGLKLSGGEKQRVA 499

Query: 515 IARVLLKNAPILIMDEATSALDSEVESAIQENLHTLMAGKTVIAIAHRLSTIAAMDRLIV 574
           IAR +LK +P+L+ DEATS+LDS  E AI   L  +  G T + +AHRLSTI   D+++V
Sbjct: 500 IARAILKGSPVLVFDEATSSLDSRSEQAILSALREVAKGHTSLVVAHRLSTIVDADQIVV 559

Query: 575 MDEGKIVEQGTHQELLAHKGIYAQLWAHQ 603
           + +G+IVEQG HQ LLA  G+YA+LW  Q
Sbjct: 560 LSQGEIVEQGNHQSLLAQNGLYAKLWRIQ 588