Pairwise Alignments

Query, 611 a.a., DNA helicase RecQ from Vibrio cholerae E7946 ATCC 55056

Subject, 708 a.a., ATP-dependent DNA helicase RecQ from Pseudomonas fluorescens FW300-N2E2

 Score =  559 bits (1440), Expect = e-163
 Identities = 279/592 (47%), Positives = 400/592 (67%), Gaps = 7/592 (1%)

Query: 17  ERVLHEVFGYQQFRVGQQEVIEAALAGRDSLVIMPTGGGKSLCYQIPALVLEGVTLVISP 76
           +RVL ++FGY  FR  Q  +IE   +G D+LV+MPTGGGKSLC+Q+PAL+  G+ +V+SP
Sbjct: 6   QRVLKDIFGYDSFRGRQGAIIERVASGGDALVLMPTGGGKSLCFQVPALLRNGLAVVVSP 65

Query: 77  LISLMKDQVDQLKANGVAAECVNSTLAREELIAIYNRMHAGQLKLLYVSPERVLTAEFIE 136
           LI+LM DQV  L+  GVAA  +NSTL+ E+   +  R+  G++K+LY++PER++    + 
Sbjct: 66  LIALMDDQVATLEELGVAAASLNSTLSAEQQRDLATRIRRGEVKMLYLAPERLVQPRMLA 125

Query: 137 RLSHLPLAMIAVDEAHCISQWGHDFRPEYASLGQLKQRFPNVPVMALTATADDATRHDIM 196
            L  L +A+ A+DEAHC+SQWGHDFR EY  LGQL + FP+VP +ALTATAD  TR +I+
Sbjct: 126 FLQSLEIALFAIDEAHCVSQWGHDFRREYLQLGQLAELFPDVPRIALTATADKRTREEIV 185

Query: 197 QRLQLNEPHQYLGSFDRPNIRYMLVEKHKPVSQVIRYLETQRGQCGIIYCGSRKKVEMLT 256
           +RL L +  ++L SFDRPNI Y +V K +P  Q++ +L  +R   GI+YC SRKKV+ + 
Sbjct: 186 ERLHLQDAERFLSSFDRPNIFYRIVPKEQPRKQLLAFLAERRSDAGIVYCLSRKKVDEVA 245

Query: 257 EKLCGNHIRAASYHAGMDADERAWVQEAFQRDDLQIVVATVAFGMGINKPNVRFVVHFDI 316
             LC     A  YHAG+  D RA+ Q+ F  ++  I+VAT+AFGMGI+KPNVRFV H D+
Sbjct: 246 AFLCEQGFPALPYHAGLPNDLRAYHQKRFLNEEGLIMVATIAFGMGIDKPNVRFVAHLDL 305

Query: 317 PRNIESYYQETGRAGRDGLPAEAMMLYDPADMNWLRRML-DEKPDGAQKQVESHKLTAMG 375
           P+++E+YYQETGRAGRDGLPA+A M Y   D+  L++ML   + D   K++E HKL AM 
Sbjct: 306 PKSLEAYYQETGRAGRDGLPADAWMAYGLQDVVMLKQMLQSSEGDERHKRLEQHKLDAML 365

Query: 376 AFAEAQTCRRQVLLNYFGEYRDKPCGNCDICLDPPKRFDATEEARKALSCVYRVNQNFGI 435
           +  E   CRRQ LL YF E   +PCG+CD C+D  + +DATE AR+ALS ++R  Q +G+
Sbjct: 366 SLCEETRCRRQTLLAYFDEDMPQPCGHCDNCVDGVETWDATEPARQALSAIFRTGQRYGV 425

Query: 436 GYVVEVLRGMQNIRIREHGHDKITTYGIGRDHSHDYWVSIFRQLIHKGMLYQNITRNSTL 495
           G++V+VL G  N ++R  GH  ++ +G+G+  +   W S+FRQL+ +G+   ++     L
Sbjct: 426 GHLVDVLLGKDNEKVRSFGHQHLSVFGVGKARTESEWRSLFRQLVARGLADIDLEGYGGL 485

Query: 496 QLTEEARPLLRGEMNIELAVPRLDTAARAAKSDKLSG----KNYDKKLFAKLRKLRKSIA 551
           +L+   RPLL+GE+ +EL   R    A A KS K       +  ++  +  LR LR+ +A
Sbjct: 486 RLSATCRPLLKGEVTLELR--RDLKPATAVKSSKSQASQLVRGEERDQWEALRALRRKLA 543

Query: 552 DDEGLPPYVVFSDATLIDMAEIMPTSYGEMLAVNGVGQRKLEKYADPFLDLI 603
           ++ G+PPYV+F D+TL++M    PTS  EM  V+GVG RKLE+Y + FL ++
Sbjct: 544 EEHGVPPYVIFPDSTLLEMLRSQPTSLAEMARVSGVGARKLERYGEAFLQVL 595