Pairwise Alignments

Query, 611 a.a., DNA helicase RecQ from Vibrio cholerae E7946 ATCC 55056

Subject, 445 a.a., DEAD/DEAH box helicase from Pseudomonas fluorescens FW300-N2C3

 Score = 79.0 bits (193), Expect = 4e-19
 Identities = 93/359 (25%), Positives = 154/359 (42%), Gaps = 48/359 (13%)

Query: 22  EVFGYQQFRVGQQEVIEAALAGRDSLVIMPTGGGKSLCYQIPALVL---EGVTLVISPLI 78
           E  GYQ     Q + + A LAGRD +    TG GK+  + +P L L   EG  +  + + 
Sbjct: 17  ETLGYQTPTPVQAQAMPAVLAGRDLMAAAQTGTGKTAGFAVPLLQLLTTEGPKVAANSVR 76

Query: 79  SLM----KDQVDQL--KANGVAAECVNSTLAREELIAIYNRMHAGQ--LKLLYVSPERVL 130
           +L+    ++  +Q+       A     ST A    ++I  +M   +  + LL  +P R+L
Sbjct: 77  ALILVPTRELAEQVHESVRQYAQNLPLSTYAVYGGVSINPQMMKLRKGVDLLVATPGRLL 136

Query: 131 TAEFIERLSHLPLAMIAVDEAHCISQWGHDFRPEYASLGQLKQRFPNVPVMALTATADDA 190
                  L    L  + +DEA  +   G  F  E A++ +   +      +  +AT  DA
Sbjct: 137 DLFRQNALKFNQLQTLVLDEADRMLDLG--FSEELANIYKALPK--KRQTLLFSATFSDA 192

Query: 191 TRHDIMQRLQLNEP---------------HQYLGSFDR---PNIRYMLVEKHKPVSQVIR 232
            R  ++    LN+P                Q++ + D+   P +   L+ KHK   QV+ 
Sbjct: 193 IR--LLAGQMLNDPLSIEVSPRNVAANTVKQWVVTVDKKRKPELFVHLMRKHK-WKQVLV 249

Query: 233 YLETQRGQCGIIYCGSRKKVEMLTEKLCGNHIRAASYHAGMDADERAWVQEAFQRDDLQI 292
           + +T+ G            V+ L EKL G  + A   H       R    + F+  ++QI
Sbjct: 250 FAKTRNG------------VDALVEKLQGLGVNADGIHGDKPQATRQRALDRFKASEVQI 297

Query: 293 VVATVAFGMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMMLYDPADMNWL 351
           +VAT     G++  ++  VV+FD+P   E Y    GR GR G   +A+ L    ++N L
Sbjct: 298 LVATDVAARGLDIEDLPLVVNFDLPIVAEDYIHRIGRTGRAGATGQAISLVCADEVNLL 356