Pairwise Alignments

Query, 611 a.a., DNA helicase RecQ from Vibrio cholerae E7946 ATCC 55056

Subject, 444 a.a., DEAD/DEAH box helicase from Pseudomonas fluorescens FW300-N2E3

 Score = 82.8 bits (203), Expect = 3e-20
 Identities = 91/346 (26%), Positives = 148/346 (42%), Gaps = 22/346 (6%)

Query: 22  EVFGYQQFRVGQQEVIEAALAGRDSLVIMPTGGGKSLCYQIPALVL---EGVTLVISPLI 78
           E  GYQ     Q + I A LAGRD +    TG GK+  + +P L L   EG  +  + + 
Sbjct: 17  ETLGYQTPTPVQTQAIPAVLAGRDLMAAAQTGTGKTAGFAVPLLQLLAMEGPKVTSNSVR 76

Query: 79  SLM----KDQVDQL--KANGVAAECVNSTLAREELIAIYNRMHAGQ--LKLLYVSPERVL 130
           +L+    ++  +Q+       A     ST A    ++I  +M   +  + LL  +P R+L
Sbjct: 77  ALILVPTRELAEQVHESVRQYAENLPLSTYAVYGGVSINPQMMKLRKGVDLLVATPGRLL 136

Query: 131 TAEFIERLSHLPLAMIAVDEAHCISQWGHDFRPEYASLGQLKQRFPNVPVMALTATADDA 190
                  L    L  + +DEA  +   G  F  E A++ +   +      +  +AT  DA
Sbjct: 137 DLFRQNALKFNQLQTLVLDEADRMLDLG--FSEELANIYKALPK--KRQTLLFSATFSDA 192

Query: 191 TRHDIMQRLQLNEPHQYLGS-----FDRPNIRYMLVEKHKPVSQVIRYLETQRGQCGIIY 245
            R   +    LN+P     S      +      + V+K +     I  L   R +  +++
Sbjct: 193 IRE--LAGKMLNDPLSIEVSPRNVAANTVKQWVVTVDKKRKAELFIHLLRKNRWKQVLVF 250

Query: 246 CGSRKKVEMLTEKLCGNHIRAASYHAGMDADERAWVQEAFQRDDLQIVVATVAFGMGINK 305
             +R  V+ L EKL G  + A   H       R    + F+  ++QI+VAT     G++ 
Sbjct: 251 AKTRNGVDALVEKLQGLSVNADGIHGDKPQATRQRALDRFKASEVQILVATDVAARGLDI 310

Query: 306 PNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMMLYDPADMNWL 351
            ++  VV+FD+P   E Y    GR GR G   EA+ L    ++N L
Sbjct: 311 EDLPLVVNFDLPIVAEDYIHRIGRTGRAGATGEAISLVCADEVNQL 356