Pairwise Alignments

Query, 611 a.a., DNA helicase RecQ from Vibrio cholerae E7946 ATCC 55056

Subject, 707 a.a., ATP-dependent DNA helicase RecQ from Pseudomonas stutzeri RCH2

 Score =  560 bits (1442), Expect = e-163
 Identities = 280/593 (47%), Positives = 403/593 (67%), Gaps = 8/593 (1%)

Query: 17  ERVLHEVFGYQQFRVGQQEVIEAALAGRDSLVIMPTGGGKSLCYQIPALVLEGVTLVISP 76
           +R+L +VFGY  FR  Q  +IE   +G D+LV+MPTGGGKSLCYQ+PAL+ +G+ +V+SP
Sbjct: 6   QRILKDVFGYDAFRGNQGAIIERVGSGGDALVLMPTGGGKSLCYQVPALLRDGLAVVVSP 65

Query: 77  LISLMKDQVDQLKANGVAAECVNSTLAREELIAIYNRMHAGQLKLLYVSPERVLTAEFIE 136
           LI+LM DQV  L   GV+A  +NSTL+ +E   I  R+   ++K+LY++PER++    + 
Sbjct: 66  LIALMDDQVATLDELGVSAVALNSTLSPDEQRDIAERIRRNEIKMLYLAPERLVQPRMLA 125

Query: 137 RLSHLPLAMIAVDEAHCISQWGHDFRPEYASLGQLKQRFPNVPVMALTATADDATRHDIM 196
            L  L +A+ A+DEAHC+SQWGHDFRPEY  LGQL + FP VP +ALTATAD  TR +I+
Sbjct: 126 FLQRLEIALFAIDEAHCVSQWGHDFRPEYMQLGQLSELFPGVPRIALTATADMRTREEIV 185

Query: 197 QRLQLNEPHQYLGSFDRPNIRYMLVEKHKPVSQVIRYLETQRGQCGIIYCGSRKKVEMLT 256
           QRL L    ++L SFDRPNI Y +V K +P  Q++ +L  +RG  GI+YC SRKKV+   
Sbjct: 186 QRLHLENAERFLSSFDRPNIFYRIVPKEQPRKQLLGFLAERRGDAGIVYCMSRKKVDDFA 245

Query: 257 EKLCGNHIRAASYHAGMDADERAWVQEAFQRDDLQIVVATVAFGMGINKPNVRFVVHFDI 316
             L      A  YHAG+  + RA+ Q+ F  ++  I+VAT+AFGMGI+KPNVRFV H D+
Sbjct: 246 AFLTEQGFPALPYHAGLPNELRAYHQKRFLNEEGLIMVATIAFGMGIDKPNVRFVAHLDL 305

Query: 317 PRNIESYYQETGRAGRDGLPAEAMMLYDPADMNWLRRML-DEKPDGAQKQVESHKLTAMG 375
           P+++E+YYQETGRAGRDGLPA+A M Y   D+ +L++ML + + D   K+VE HKL AM 
Sbjct: 306 PKSLEAYYQETGRAGRDGLPADAWMAYGLQDVIFLKQMLNNSEGDERHKRVEQHKLDAML 365

Query: 376 AFAEAQTCRRQVLLNYFGEYRDKPCGNCDICLDPPKRFDATEEARKALSCVYRVNQNFGI 435
           A  E   CRRQ LL YF E    PCG+CD C+D  + +DATE AR+ALS +YR  Q +G+
Sbjct: 366 ALCEETRCRRQALLAYFDEELPSPCGHCDNCVDGVQTWDATEPARQALSAIYRSGQRYGV 425

Query: 436 GYVVEVLRGMQNIRIREHGHDKITTYGIGRDHSHDYWVSIFRQLIHKGMLYQNITRNSTL 495
           G++V+VL G  N ++R  GH  ++ +G+G+  +   W S+FRQL+ +G+   ++     L
Sbjct: 426 GHLVDVLLGRDNDKVRGLGHQHLSVFGVGKALAETEWRSLFRQLVARGLADVDLDGFGGL 485

Query: 496 QLTEEARPLLRGEMNIELAVPRLDTAARAAKSDKLSG----KNYDKKLFAKLRKLRKSIA 551
           +L++  RPLLRGE+++EL   R D +++A K    +     ++ +++ +  LR LR+ +A
Sbjct: 486 RLSDSCRPLLRGEVSLEL---RRDLSSKAPKPAASAASQLVRSEERETWEALRTLRRKLA 542

Query: 552 DDEGLPPYVVFSDATLIDMAEIMPTSYGEMLAVNGVGQRKLEKYADPFLDLIQ 604
           ++  +PPYV+F DATL++M    P S  +M  ++GVG RKLE+Y   FL+++Q
Sbjct: 543 EEHSVPPYVIFPDATLLEMLRSQPASLSDMAMISGVGARKLERYGQAFLEVLQ 595