Pairwise Alignments

Query, 611 a.a., DNA helicase RecQ from Vibrio cholerae E7946 ATCC 55056

Subject, 631 a.a., ATP-dependent DNA helicase RecQ from Acidovorax sp. GW101-3H11

 Score =  522 bits (1344), Expect = e-152
 Identities = 285/617 (46%), Positives = 398/617 (64%), Gaps = 33/617 (5%)

Query: 19  VLHEVFGYQQFRVGQQEVIEAALAGRDSLVIMPTGGGKSLCYQIPALVLE----GVTLVI 74
           VLH VFGY+QFR  QQ ++E  + G D+LV+MPTGGGKSLCYQ+PA+V +    GVT+VI
Sbjct: 15  VLHGVFGYEQFRGPQQAIVEHVIGGGDALVLMPTGGGKSLCYQVPAIVRQQQGRGVTIVI 74

Query: 75  SPLISLMKDQVDQLKANGVAAECVNSTLAREELIAIYNRMHAGQLKLLYVSPERVLTAEF 134
           SPLI+LM DQV  L   GV A  +NSTL+ +E   +  R+  G + LLY +PER+ T  F
Sbjct: 75  SPLIALMHDQVGALHEAGVDAAFLNSTLSFDEAQDVELRLQTGDITLLYAAPERLNTPRF 134

Query: 135 IERLSHL----PLAMIAVDEAHCISQWGHDFRPEYASLGQLKQRFPNVPVMALTATADDA 190
           +  L  L     L++ A+DEAHC+SQWGHDFRPEY +L  L +R+  VP +ALTATADD 
Sbjct: 135 LGLLDSLYQGGHLSLFAIDEAHCVSQWGHDFRPEYRALTVLHERYAGVPRIALTATADDL 194

Query: 191 TRHDIMQRLQLNEPHQYLGSFDRPNIRYMLVEKHKPVSQVIRYLETQR-GQCGIIYCGSR 249
           TR DI++RLQL +   ++ SFDRPNIRY + EK    +Q++R++E +  G+ G++YC SR
Sbjct: 195 TRADIIERLQLEDARLFISSFDRPNIRYRIEEKKDATTQLLRFIEREHAGEAGVVYCQSR 254

Query: 250 KKVEMLTEKLCGNHIRAASYHAGMDADERAWVQEAFQRDDLQIVVATVAFGMGINKPNVR 309
           K+VE L   LC   + A  YHAG+D   R   Q+ F R++  ++VAT+AFGMGI+KP+VR
Sbjct: 255 KRVEELAATLCDAGLTALPYHAGLDTKVRQKNQDRFLREEGIVMVATIAFGMGIDKPDVR 314

Query: 310 FVVHFDIPRNIESYYQETGRAGRDGLPAEAMMLYDPADMNWLRRMLDEKPDGAQ-KQVES 368
           FV H D+P+NIE YYQETGRAGRDGL A+A M Y   D+   RRM+DE P G + KQ   
Sbjct: 315 FVAHVDMPKNIEGYYQETGRAGRDGLNADAWMAYGLNDVVNQRRMIDESPAGEEFKQALR 374

Query: 369 HKLTAMGAFAEAQTCRRQVLLNYFGEYRDKPCGNCDICLDPPKRFDATEEARKALSCVYR 428
            KL A+ A AEA  CRR  LL YFGE    PCGNCD CL+PP  +D T+ ARK LS +YR
Sbjct: 375 GKLDALLALAEATDCRRVRLLAYFGE-ESTPCGNCDNCLNPPAVWDGTDAARKLLSTIYR 433

Query: 429 VNQ----NFGIGYVVEVLRGMQNIRIREHGHDKITTYGIGRDHSHDYWVSIFRQL----- 479
           V+      FG G++++++RG    ++++ GHDK++T+G+G+++S      + RQL     
Sbjct: 434 VHAASGLTFGTGHIMDIVRGKDTEKVQQFGHDKLSTFGVGKEYSEAQLRGVLRQLLATGA 493

Query: 480 --IHKGMLYQNITRNSTLQLTEEARPLLRGEMNIELAVPRLDTAARAAKSDKLSGK---- 533
             +HK ML    + + TL LTE +R +L+GE+ ++L        A+ A++ K +G     
Sbjct: 494 VGLHKVMLESGHSFD-TLSLTEGSRAVLKGEVPVQLRESTAAAPAKRARTRKGTGSAPPA 552

Query: 534 -----NYDKKL-FAKLRKLRKSIADDEGLPPYVVFSDATLIDMAEIMPTSYGEMLAVNGV 587
                  D ++ F  L+  R  +A +  LP YV+F DATL  +AE  P S  ++  ++G+
Sbjct: 553 AAANLGPDAQVRFINLKSWRAEVAREHNLPAYVIFHDATLAAIAERNPASLDDLQGISGM 612

Query: 588 GQRKLEKYADPFLDLIQ 604
           G +KLE Y    L +++
Sbjct: 613 GAKKLEAYGADVLRVVR 629