Pairwise Alignments

Query, 611 a.a., DNA helicase RecQ from Vibrio cholerae E7946 ATCC 55056

Subject, 709 a.a., ATP-dependent DNA helicase RecQ from Pseudomonas syringae pv. syringae B728a

 Score =  560 bits (1443), Expect = e-164
 Identities = 277/591 (46%), Positives = 402/591 (68%), Gaps = 4/591 (0%)

Query: 17  ERVLHEVFGYQQFRVGQQEVIEAALAGRDSLVIMPTGGGKSLCYQIPALVLEGVTLVISP 76
           +RVL ++FGY  FR  Q  +IE   +G D+LV+MPTGGGKSLC+Q+P L+ +G+ +V+SP
Sbjct: 6   QRVLKDIFGYDSFRGRQGAIIERVASGGDALVLMPTGGGKSLCFQVPGLLRDGLCVVVSP 65

Query: 77  LISLMKDQVDQLKANGVAAECVNSTLAREELIAIYNRMHAGQLKLLYVSPERVLTAEFIE 136
           LI+LM DQV  L   GV+A  +NSTL+ E+   + NR+  G++K+LY++PER++    + 
Sbjct: 66  LIALMDDQVATLDELGVSAAALNSTLSAEQQRDLANRIRLGEVKMLYLAPERLVQPRMLS 125

Query: 137 RLSHLPLAMIAVDEAHCISQWGHDFRPEYASLGQLKQRFPNVPVMALTATADDATRHDIM 196
            L +L +A+ A+DEAHC+SQWGHDFRPEY  LGQL + FP VP +ALTATAD  TR +I+
Sbjct: 126 FLQNLKIALFAIDEAHCVSQWGHDFRPEYLQLGQLAELFPEVPRIALTATADKRTREEIV 185

Query: 197 QRLQLNEPHQYLGSFDRPNIRYMLVEKHKPVSQVIRYLETQRGQCGIIYCGSRKKVEMLT 256
            RL L    ++L SFDRPNI Y +V K +P  Q++ +L  +R   GI+YC SRKKV+ + 
Sbjct: 186 TRLHLQNAERFLSSFDRPNIFYRIVPKEQPRKQLLAFLSERRSDAGIVYCLSRKKVDEVA 245

Query: 257 EKLCGNHIRAASYHAGMDADERAWVQEAFQRDDLQIVVATVAFGMGINKPNVRFVVHFDI 316
             L  N   A  YHAG+ ++ RA  Q+ F  ++  I+VAT+AFGMGI+KPNVRFV H D+
Sbjct: 246 VFLSDNGYPALPYHAGLPSETRAANQKRFLNEEGLIMVATIAFGMGIDKPNVRFVAHMDL 305

Query: 317 PRNIESYYQETGRAGRDGLPAEAMMLYDPADMNWLRRML-DEKPDGAQKQVESHKLTAMG 375
           P+++E+YYQETGRAGRDGLPA+A M Y   D+  L++ML + + D   K++E HKL AM 
Sbjct: 306 PKSLEAYYQETGRAGRDGLPADAWMAYGLQDVLMLKQMLQNSEGDERHKRLEQHKLDAML 365

Query: 376 AFAEAQTCRRQVLLNYFGEYRDKPCGNCDICLDPPKRFDATEEARKALSCVYRVNQNFGI 435
           A  E   CRRQ LL YF E    PCG+CD C+D  + +DATE AR+ALS +YR  Q +G+
Sbjct: 366 ALCEETRCRRQTLLAYFDEDMPNPCGHCDNCVDGVQTWDATEPARQALSAIYRTGQRYGV 425

Query: 436 GYVVEVLRGMQNIRIREHGHDKITTYGIGRDHSHDYWVSIFRQLIHKGMLYQNITRNSTL 495
           G++V+VL G  N ++   GH  ++ +G+G+  +   W S+FRQL+ +G+   ++     L
Sbjct: 426 GHLVDVLLGKSNDKVESFGHQHLSVFGVGKARTESEWRSLFRQLVARGLADIDLEGYGGL 485

Query: 496 QLTEEARPLLRGEMNIELAVP-RLDTAARAAKSDKLSG--KNYDKKLFAKLRKLRKSIAD 552
           +L+E  RPLLRGE+++EL    +  T +R++     S   +  +++ +  LR LR+ +A+
Sbjct: 486 RLSETCRPLLRGEVSLELRQDLKPQTTSRSSSGSPASQLVRGEEREQWEALRALRRKLAE 545

Query: 553 DEGLPPYVVFSDATLIDMAEIMPTSYGEMLAVNGVGQRKLEKYADPFLDLI 603
           + G+PPYV+F D+TL++M    P S  EM  V+GVG RKLE+Y + FL+++
Sbjct: 546 EHGVPPYVIFPDSTLLEMLRSKPGSMAEMAKVSGVGARKLERYGEAFLEVL 596