Pairwise Alignments

Query, 611 a.a., DNA helicase RecQ from Vibrio cholerae E7946 ATCC 55056

Subject, 849 a.a., DNA damage response helicase, ligase-associated (from data) from Sinorhizobium meliloti 1021

 Score = 71.6 bits (174), Expect = 1e-16
 Identities = 89/351 (25%), Positives = 146/351 (41%), Gaps = 43/351 (12%)

Query: 30  RVGQQEVIEAALAGRDSLVIMPTGGGKSLCYQIPALV-------------LEGV-TLVIS 75
           R  Q E++  A AG  +L+I PTG GK+L   +P+LV               G+ TL IS
Sbjct: 35  RAHQLELLSRAEAGESTLLIAPTGAGKTLAGFLPSLVDITRRGRIPPGAPFTGIHTLYIS 94

Query: 76  PL----ISLMKDQVDQLKANGVAAECVNSTLAREELIAIYNRMHAGQLKLLYVSPERV-- 129
           PL    + + ++ +  +   G+     N T    +      R       +L  +PE++  
Sbjct: 95  PLKALAVDIERNLMKPVGEMGLPVSIENRTGDTPQ--GKRQRQKLNPPDILLTTPEQLAL 152

Query: 130 LTAEFIERLSHLPLAMIAVDEAHCI--SQWGHDFRPEYASLGQLKQRFPNVPVMALTATA 187
           L A          L  + +DE H +  S+ GH      A L +L  R   + + A  A  
Sbjct: 153 LLANGEAERFFKDLRYVVLDELHSLVMSKRGHLLSLGLARLRRLAPRLQTMGLSATVADP 212

Query: 188 DDATRHDIMQRLQLNEPHQYLGSFD---RPNIRYMLVEKHKP---------VSQVIRYLE 235
            D  R  + Q L   E H  L +     +P I  +  E   P         +  V  Y  
Sbjct: 213 MDLQRWLVAQFLA-KENHAGLITVSGGAKPEISILRTENQVPWAGHSARYAIPDV--YAA 269

Query: 236 TQRGQCGIIYCGSRKKVEMLTE---KLCGNHIRAASYHAGMDADERAWVQEAFQRDDLQI 292
            +  +  +++  +R + EML +   K+  + +  A +H  +D  +R  V+ A   + L+ 
Sbjct: 270 IKEHRTTLLFVNTRSQAEMLFQELWKINDDDLPIALHHGSLDVAQRRRVEAAMAENRLRA 329

Query: 293 VVATVAFGMGINKPNVRFVVHFDIPRNIESYYQETGRAG-RDGLPAEAMML 342
           VVAT    +GI+  +V  VVH   P+      Q  GRA  R   P+ A+++
Sbjct: 330 VVATSTLDLGIDWGDVDLVVHVGAPKGASRLAQRIGRANHRMDEPSRAILV 380