Pairwise Alignments

Query, 611 a.a., DNA helicase RecQ from Vibrio cholerae E7946 ATCC 55056

Subject, 607 a.a., ATP-dependent DNA helicase RecQ (RefSeq) from Shewanella amazonensis SB2B

 Score =  715 bits (1846), Expect = 0.0
 Identities = 342/590 (57%), Positives = 464/590 (78%), Gaps = 2/590 (0%)

Query: 20  LHEVFGYQQFRVGQQEVIEAALAGRDSLVIMPTGGGKSLCYQIPALVLEGVTLVISPLIS 79
           L +VFGY+ FR GQ+EV+     G D LVIMPTGGGKSLCYQ+PALVL GVTLV+SPLIS
Sbjct: 17  LQQVFGYRDFRPGQREVMTRVCQGEDCLVIMPTGGGKSLCYQVPALVLPGVTLVVSPLIS 76

Query: 80  LMKDQVDQLKANGVAAECVNSTLAREELIAIYNRMHAGQLKLLYVSPERVLTAEFIERLS 139
           LMKDQVD L  +GVAA  +NS+  RE+ I +  ++  G+LKLLYVSPER+L  +F+ RL 
Sbjct: 77  LMKDQVDSLIQSGVAAAYLNSSQPREQAIEVLRQLRFGELKLLYVSPERLLQGDFLSRLD 136

Query: 140 HLPLAMIAVDEAHCISQWGHDFRPEYASLGQLKQRFPNVPVMALTATADDATRHDIMQRL 199
            L +++ AVDEAHCIS+WGHDFRPEYA+LGQLKQRFP+VPVMALTATAD+ATR  I +RL
Sbjct: 137 ELHISLFAVDEAHCISEWGHDFRPEYAALGQLKQRFPHVPVMALTATADEATRSSICERL 196

Query: 200 QLNEPHQYLGSFDRPNIRYMLVEKHKPVSQVIRYLETQRGQCGIIYCGSRKKVEMLTEKL 259
            + +P Q+L SFDRPNIRY + EK    +Q+ +++++Q+G  GI+YC SR++V+ + E+L
Sbjct: 197 GI-QPFQHLASFDRPNIRYTVAEKLNAANQLRQFIQSQKGANGIVYCSSRRRVDEVAERL 255

Query: 260 CGNHIRAASYHAGMDADERAWVQEAFQRDDLQIVVATVAFGMGINKPNVRFVVHFDIPRN 319
                 A  YHAGM  DERA VQ+ F +D + +VVATVAFGMGINK NVRFVVH+DIP++
Sbjct: 256 RQQGFYAEGYHAGMTQDERASVQDRFLKDQIDVVVATVAFGMGINKSNVRFVVHYDIPKS 315

Query: 320 IESYYQETGRAGRDGLPAEAMMLYDPADMNWLRRMLDEKPDGAQKQVESHKLTAMGAFAE 379
           IESYYQETGRAGRDGL AEA++L+DPAD+  +R +++++  G Q+QVE HKL +M AFAE
Sbjct: 316 IESYYQETGRAGRDGLDAEALLLFDPADIGRVRHLIEQQEPGPQQQVEFHKLYSMAAFAE 375

Query: 380 AQTCRRQVLLNYFGEYRDKPCGNCDICLDPPKRFDATEEARKALSCVYRVNQNFGIGYVV 439
           AQTCRRQVLL+YFGE  ++PCGNCDIC+DPPKR++ TE+A+K LSC+YR+NQ FG+ +++
Sbjct: 376 AQTCRRQVLLHYFGEAANEPCGNCDICIDPPKRYNGTEDAQKVLSCIYRLNQRFGVNHLI 435

Query: 440 EVLRGMQNIRIREHGHDKITTYGIGRDHSHDYWVSIFRQLIHKGMLYQNITRNSTLQLTE 499
           EVLRG +   + + GHDK++T+GIG++ S +YW+S+ RQLIH G+  Q+ITR S+++L  
Sbjct: 436 EVLRGSKAASVVDRGHDKLSTWGIGKEKSTEYWLSVTRQLIHLGLASQDITRGSSVRLNS 495

Query: 500 EARPLLRGEMNIELAVPRLDTA-ARAAKSDKLSGKNYDKKLFAKLRKLRKSIADDEGLPP 558
            ARP+L+GE+ + LA PRL  +     ++   + +NYD+KLFA+L+ LR++IA+++ +PP
Sbjct: 496 AARPVLKGEVALMLAEPRLSLSDVPRKRTSSRTPQNYDRKLFARLKNLRRTIAEEQDVPP 555

Query: 559 YVVFSDATLIDMAEIMPTSYGEMLAVNGVGQRKLEKYADPFLDLIQEHLT 608
           Y+VF+DATL +MA ++P S  E+LAVNGVG+RKL ++   FLD I  +++
Sbjct: 556 YLVFNDATLAEMAWMLPKSEAELLAVNGVGERKLARFGGEFLDEIAAYIS 605