Pairwise Alignments

Query, 611 a.a., DNA helicase RecQ from Vibrio cholerae E7946 ATCC 55056

Subject, 609 a.a., DNA helicase RecQ from Parabacteroides merdae CL09T00C40

 Score =  498 bits (1283), Expect = e-145
 Identities = 253/598 (42%), Positives = 370/598 (61%), Gaps = 16/598 (2%)

Query: 19  VLHEVFGYQQFRVGQQEVIEAALAGRDSLVIMPTGGGKSLCYQIPALVLEGVTLVISPLI 78
           +L   FGY  FR  Q E+I+  L   DSLV+MPTGGGKS+C+Q+PA+ + G  +V+SPLI
Sbjct: 7   LLKRFFGYTSFRPLQAEIIQRTLQKEDSLVLMPTGGGKSICFQLPAIYMPGTAIVVSPLI 66

Query: 79  SLMKDQVDQLKANGVAAECVNSTLAREELIAIYNRMHAGQLKLLYVSPERVLTAEFIERL 138
           +LMKDQV+ L ANG+ A  +NS +  EE   +      G++KLLY+SPE +++ E    L
Sbjct: 67  ALMKDQVEGLIANGIPAATLNSMMPEEERHRVRQLCIQGKVKLLYISPEGIIS-ELHWLL 125

Query: 139 SHLPLAMIAVDEAHCISQWGHDFRPEYASLGQLKQRFPNVPVMALTATADDATRHDIMQR 198
             + +++IA+DEAHCIS WGHDFRPEY  L  LK+ FP VP++ALTATAD  TR DI+ +
Sbjct: 126 PRIDISLIAIDEAHCISHWGHDFRPEYTQLSVLKENFPKVPIIALTATADKITRTDILNQ 185

Query: 199 LQLNEPHQYLGSFDRPNIRYML---VEKHKPVSQVIRYLETQRGQCGIIYCGSRKKVEML 255
           L+L +P  ++ SFDRPN+   +   + K + ++ ++ ++     Q GIIYC SR   E L
Sbjct: 186 LKLRDPKTFISSFDRPNLSLTIRRGLSKKEKIAAIVHFINRHHRQSGIIYCMSRNSTESL 245

Query: 256 TEKLCGNHIRAASYHAGMDADERAWVQEAFQRDDLQIVVATVAFGMGINKPNVRFVVHFD 315
            E+L    IRA +YHAG+ +D+R   Q+ F  D + +V ATVAFGMGI+K NVR+V+H++
Sbjct: 246 VEELSEYSIRAVAYHAGLSSDKREKAQDDFINDRVNVVCATVAFGMGIDKSNVRWVIHYN 305

Query: 316 IPRNIESYYQETGRAGRDGLPAEAMMLYDPADMNWLRRMLDEKPDGAQKQVESHKLTAMG 375
           +P +IE+YYQE GRAGRDG+ ++ ++ Y   D+  LRR  +E     QK V   KL  M 
Sbjct: 306 MPASIENYYQEIGRAGRDGMKSDTLLFYSVGDILLLRRFAEE---SGQKDVSLQKLNRMR 362

Query: 376 AFAEAQTCRRQVLLNYFGEYRDKPCGNCDICLDPPKRFDATEEARKALSCVYRVNQNFGI 435
            + EA  CRR++LL+YFGE  DK CGNCD+C +PP+RFD +   +KALS ++R  Q   +
Sbjct: 363 RYCEADICRRRILLSYFGEETDKDCGNCDVCKNPPQRFDGSILVQKALSGIFRTGQTANM 422

Query: 436 GYVVEVLRGMQNIRIREHGHDKITTYGIGRDHSHDYWVSIFRQLIHKGMLYQNITRNSTL 495
             ++++LRG +   ++E G+DK+ TYG+G+D S+  W     Q++  G +  +      L
Sbjct: 423 HLLIDILRGAEKDELKEKGYDKLKTYGVGKDLSYKEWKEYLYQMLQLGYIEIDYMSAGHL 482

Query: 496 QLTEEARPLLRGEMNI---------ELAVPRLDTAARAAKSDKLSGKNYDKKLFAKLRKL 546
           ++T   R +L GE            + A+P      +      +   + D+ L   L++L
Sbjct: 483 KVTPLGRKVLFGEQQALMTIYQKIKDFALPTKKGGYKYRPIRPIESTSVDETLLDSLQQL 542

Query: 547 RKSIADDEGLPPYVVFSDATLIDMAEIMPTSYGEMLAVNGVGQRKLEKYADPFLDLIQ 604
           RK IA+ E  P Y++FSD  L DM    P +  E   + GVGQ KL+KY   F+ LI+
Sbjct: 543 RKQIAEREHTPAYILFSDDALEDMVRKKPVTLDEFSEIRGVGQLKLDKYGKVFVALIR 600