Pairwise Alignments

Query, 611 a.a., DNA helicase RecQ from Vibrio cholerae E7946 ATCC 55056

Subject, 516 a.a., putative ATP-dependent RNA helicase RhlE from Phaeobacter inhibens DSM 17395

 Score = 72.4 bits (176), Expect = 4e-17
 Identities = 81/345 (23%), Positives = 138/345 (40%), Gaps = 21/345 (6%)

Query: 22  EVFGYQQFRVGQQEVIEAALAGRDSLVIMPTGGGKSLCYQIPALVLEGV---------TL 72
           E  GY+     Q   I  AL GRD L I  TG GK+  + +P + L            +L
Sbjct: 18  EEAGYESPTPIQAGAIPPALEGRDVLGIAQTGTGKTASFTLPMITLLARGRARARMPRSL 77

Query: 73  VISPLISLMKDQVDQLKANGVAAECVNSTLAREELIAIYNRMHAGQLKLLYVSPERVLTA 132
           V+ P   L     +         +   + L         + +    + +L  +P R+L  
Sbjct: 78  VLCPTRELAAQVAENFDTYTKHLKLTKALLIGGVSFKEQDTLIDKGVDVLIATPGRLLDH 137

Query: 133 EFIERLSHLPLAMIAVDEAHCISQWGHDFRPEYASLGQL----KQRFPNVPVMALTATAD 188
               +L    + ++ VDEA  +   G  F P+   +  L    +Q       MA      
Sbjct: 138 FERGKLILSDVKVMVVDEADRMLDMG--FIPDIERIFGLTPFTRQTLFFSATMAPEIERI 195

Query: 189 DATRHDIMQRLQLNEPHQYLGSFDRPNIRYMLVEKHKPVSQ---VIRYLETQRGQ-C--G 242
             T      R+++        +  +  + +    + +  S+   ++R+L  Q G+ C   
Sbjct: 196 TNTFLSAPARVEVARQATTSENITQGVVLFKASRRDREGSEKRKLLRHLIDQEGEKCTNA 255

Query: 243 IIYCGSRKKVEMLTEKLCGNHIRAASYHAGMDADERAWVQEAFQRDDLQIVVATVAFGMG 302
           II+C  +  V+++ + L      AA  H  +D  +R    E F+   L+ +VA+     G
Sbjct: 256 IIFCNRKTDVDIVAKSLKKYGYDAAPIHGDLDQSQRTKTLEGFREGSLRFLVASDVAARG 315

Query: 303 INKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMMLYDPAD 347
           ++ P+V  V +FD+P + E Y    GR GR G    AMM+  P D
Sbjct: 316 LDVPSVSHVFNFDVPSHAEDYVHRIGRTGRAGRDGSAMMICVPKD 360