Pairwise Alignments

Query, 611 a.a., DNA helicase RecQ from Vibrio cholerae E7946 ATCC 55056

Subject, 630 a.a., recombinase RecQ from Pedobacter sp. GW460-11-11-14-LB5

 Score =  300 bits (769), Expect = 9e-86
 Identities = 152/358 (42%), Positives = 239/358 (66%), Gaps = 2/358 (0%)

Query: 15  TPERVLHEVFGYQQFRVGQQEVIEAALAGRDSLVIMPTGGGKSLCYQIPALVLEGVTLVI 74
           T   +L + +G+Q FR  Q+++I + L G DSL ++PTGGGKS+C+Q+PALV EG+ +V+
Sbjct: 2   TAIEILQKYWGHQAFRPLQEDIISSVLEGNDSLALLPTGGGKSICFQVPALVKEGICIVV 61

Query: 75  SPLISLMKDQVDQLKANGVAAECVNSTLAREELIAIYNRMHAGQLKLLYVSPERVLTAEF 134
           SPLI+LMKDQV+ LK+ G+ A  + + + + E+  + +    G++K LY+SPER+L+   
Sbjct: 62  SPLIALMKDQVEHLKSKGIEAIAIYAGMGKREIDILLDNCIYGKIKFLYLSPERLLSDLV 121

Query: 135 IERLSHLPLAMIAVDEAHCISQWGHDFRPEYASLGQLKQRFPNVPVMALTATADDATRHD 194
             R+S++ + +IAVDEAHCISQWG+DFRP Y  L +L++  PNVPV+ALTATA    R D
Sbjct: 122 RVRISYMNVNLIAVDEAHCISQWGYDFRPPYQQLSKLREILPNVPVLALTATATAFVRKD 181

Query: 195 IMQRLQLNEPHQYLGSFDRPNIRYMLVEKHKPVSQVIRYLETQRGQCGIIYCGSRKKVEM 254
           I+++L++ +P  ++ SF R N+ Y++        ++I   +  +G  G++Y  +R++   
Sbjct: 182 IVEKLEMKDPKVFVKSFARDNLSYVVFGNEDKYKKLIDICKNVKG-TGLVYVRNRRETAE 240

Query: 255 LTEKLCGNHIRAASYHAGMDADERAWVQEAFQRDDLQIVVATVAFGMGINKPNVRFVVHF 314
           ++  +  N I+A  YHAG++ D R   QE ++ +  +I+VAT AFGMGI+K +VRFVVH 
Sbjct: 241 VSNFINRNQIKADFYHAGLERDTRFLKQEEWKNNKTRIMVATNAFGMGIDKADVRFVVHL 300

Query: 315 DIPRNIESYYQETGRAGRDGLPAEAMMLYDPADMNWLR-RMLDEKPDGAQKQVESHKL 371
           D+P ++E+YYQE GRAGRD   + A++L + +D+  L  R LD  P   + +   H L
Sbjct: 301 DLPESLEAYYQEAGRAGRDEKRSYAVLLANQSDVLGLESRYLDSFPSPDEIRKTYHYL 358



 Score = 44.3 bits (103), Expect = 2e-08
 Identities = 24/69 (34%), Positives = 37/69 (53%), Gaps = 1/69 (1%)

Query: 355 LDEKPDGAQKQVESHKLTAMGAFAEAQTCRRQVLLNYFGEYRDKPCGNCDICLDPPKRFD 414
           LD K    +K++   ++ A+  +A +  CR   LLNYF E+    CG CD+CL   KR +
Sbjct: 511 LDVKYLELRKEILHKQINAVVGYASSNLCRSVQLLNYFDEHHATKCGVCDVCL-AEKRTE 569

Query: 415 ATEEARKAL 423
              +  +AL
Sbjct: 570 NQSQIGEAL 578