Pairwise Alignments

Query, 611 a.a., DNA helicase RecQ from Vibrio cholerae E7946 ATCC 55056

Subject, 610 a.a., ATP-dependent DNA helicase RecQ (RefSeq) from Shewanella loihica PV-4

 Score =  730 bits (1885), Expect = 0.0
 Identities = 353/590 (59%), Positives = 461/590 (78%), Gaps = 2/590 (0%)

Query: 20  LHEVFGYQQFRVGQQEVIEAALAGRDSLVIMPTGGGKSLCYQIPALVLEGVTLVISPLIS 79
           L  VFGY+ FR GQ+EVIE    G+D+LVIMPTGGGKSLCYQ+PALVL G+TLV+SPLIS
Sbjct: 20  LQTVFGYRTFRTGQREVIEQVCGGQDALVIMPTGGGKSLCYQLPALVLHGLTLVVSPLIS 79

Query: 80  LMKDQVDQLKANGVAAECVNSTLAREELIAIYNRMHAGQLKLLYVSPERVLTAEFIERLS 139
           LMKDQVD LK  GVAA  +NS+ +REE + IY ++H G+LKLLYVSPER+LT  FIERL 
Sbjct: 80  LMKDQVDSLKQMGVAAAYLNSSQSREEALTIYRQLHNGELKLLYVSPERLLTDSFIERLH 139

Query: 140 HLPLAMIAVDEAHCISQWGHDFRPEYASLGQLKQRFPNVPVMALTATADDATRHDIMQRL 199
           +LPL++ A+DEAHCISQWGHDFRPEYA+LGQLKQ FP VP+MALTATAD ATR DI QRL
Sbjct: 140 NLPLSLFAIDEAHCISQWGHDFRPEYAALGQLKQLFPRVPMMALTATADKATREDICQRL 199

Query: 200 QLNEPHQYLGSFDRPNIRYMLVEKHKPVSQVIRYLETQRGQCGIIYCGSRKKVEMLTEKL 259
            +  P + L SFDRPNIRY + EK    +Q+ ++++ Q G  GIIYC SR++V+ + E+L
Sbjct: 200 GI-APFELLTSFDRPNIRYTVAEKLNAANQLRQFIQAQNGNSGIIYCSSRRRVDEVAERL 258

Query: 260 CGNHIRAASYHAGMDADERAWVQEAFQRDDLQIVVATVAFGMGINKPNVRFVVHFDIPRN 319
                 A +YHAG   +ERA +QE F +D L IVVATVAFGMGINK NVRFVVH+DIP++
Sbjct: 259 RMQGYHADAYHAGKTQEERADIQERFLKDQLDIVVATVAFGMGINKSNVRFVVHYDIPKS 318

Query: 320 IESYYQETGRAGRDGLPAEAMMLYDPADMNWLRRMLDEKPDGAQKQVESHKLTAMGAFAE 379
           +E+YYQETGRAGRDGL AEA ML+DPAD+  +R +++++  G Q+QVE HKL  M AFAE
Sbjct: 319 VEAYYQETGRAGRDGLDAEAFMLFDPADIGRVRHLIEQQEPGPQQQVEYHKLNTMAAFAE 378

Query: 380 AQTCRRQVLLNYFGEYRDKPCGNCDICLDPPKRFDATEEARKALSCVYRVNQNFGIGYVV 439
           AQTCRRQVLL+YF E   +PCGNCDICLDPPKR+D  E+A+K LSC++R+ Q FG+ +++
Sbjct: 379 AQTCRRQVLLHYFDESASEPCGNCDICLDPPKRYDGVEDAQKVLSCIFRLQQKFGVNHLI 438

Query: 440 EVLRGMQNIRIREHGHDKITTYGIGRDHSHDYWVSIFRQLIHKGMLYQNITRNSTLQLTE 499
           EVLRG +   + + GHDK++T+GIG++ SH++W+SI RQ+IH G   Q+ITR S ++L  
Sbjct: 439 EVLRGSKAASVVDRGHDKLSTWGIGKEKSHEFWLSIIRQIIHLGFASQDITRGSAIKLNP 498

Query: 500 EARPLLRGEMNIELAVPRLD-TAARAAKSDKLSGKNYDKKLFAKLRKLRKSIADDEGLPP 558
           +AR +L+GE+ ++LA PR+  T     +S   +  NYD+KLFA+L++LR+S+A++  +PP
Sbjct: 499 QARAVLKGELPLQLAEPRISITTHVKRRSSSRAPINYDRKLFARLKQLRRSLAEELDVPP 558

Query: 559 YVVFSDATLIDMAEIMPTSYGEMLAVNGVGQRKLEKYADPFLDLIQEHLT 608
           Y+VF+DATL +MA ++PTS GEMLAVNGVG+ KL ++   FLD I ++LT
Sbjct: 559 YLVFNDATLAEMAAMLPTSPGEMLAVNGVGETKLNRFGGEFLDEINDYLT 608