Pairwise Alignments

Query, 611 a.a., DNA helicase RecQ from Vibrio cholerae E7946 ATCC 55056

Subject, 612 a.a., ATP-dependent DNA helicase RecQ from Dechlorosoma suillum PS

 Score =  543 bits (1398), Expect = e-158
 Identities = 285/600 (47%), Positives = 396/600 (66%), Gaps = 15/600 (2%)

Query: 19  VLHEVFGYQQFRVGQQEVIEAALAGRDSLVIMPTGGGKSLCYQIPALVLEGVTLVISPLI 78
           +LH VFGY  FR  Q +++     G D+LV+MPTGGGKSLCYQIPAL+  G  +VISPLI
Sbjct: 12  ILHRVFGYTAFRGSQGDIVGHVADGGDALVLMPTGGGKSLCYQIPALLRHGCGVVISPLI 71

Query: 79  SLMKDQVDQLKANGVAAECVNSTLAREELIAIYNRMHAGQLKLLYVSPERVLTAEFIERL 138
           +LM+DQVD L   GV A  +NSTL  +++  +  R+  G L LLYV+PER+LT   +  L
Sbjct: 72  ALMQDQVDALTQLGVKAAYLNSTLDWQQVQEVERRVLCGDLDLLYVAPERLLTDRCLSLL 131

Query: 139 SHLP----LAMIAVDEAHCISQWGHDFRPEYASLGQLKQRFPNVPVMALTATADDATRHD 194
             L     LA+ A+DEAHC+SQWGHDFRPEY  L  L  R+P+VP +ALTATAD ATR +
Sbjct: 132 DKLEEDKRLALFAIDEAHCVSQWGHDFRPEYLQLSALHNRYPDVPRIALTATADTATREE 191

Query: 195 IMQRLQLNEPHQYLGSFDRPNIRYMLVEKHKPVSQVIRYLETQRGQCGIIYCGSRKKVEM 254
           +  RL L E   ++ SFDRPNIRY++VEK  P  Q++ +L   +G+ GI+YC SRKKVE 
Sbjct: 192 MRVRLGLTEARVFVASFDRPNIRYLIVEKDNPRKQLLAFLANHKGEAGIVYCLSRKKVEE 251

Query: 255 LTEKLCGNHIRAASYHAGMDADERAWVQEAFQRDDLQIVVATVAFGMGINKPNVRFVVHF 314
               L    I A  YHAG+ A+ RA  Q  F R++   +VAT+AFGMGI+KP+VRFV H 
Sbjct: 252 TAAWLTSQGIPALPYHAGLPAEVRADNQRTFLREEGITMVATIAFGMGIDKPDVRFVAHL 311

Query: 315 DIPRNIESYYQETGRAGRDGLPAEAMMLYDPADMNWLR-RMLDEKPDGAQKQVESHKLTA 373
           D+P+++E+YYQETGRAGRDG PAEA M Y   D+   R R+ D      QK++E+ KL A
Sbjct: 312 DLPKSLEAYYQETGRAGRDGEPAEAWMAYGLQDVVLQRSRIEDSVAPEEQKRLEAQKLNA 371

Query: 374 MGAFAEAQTCRRQVLLNYFGEYRDKPCGNCDICLDPPKRFDATEEARKALSCVYRVNQNF 433
           + A+AE+  CRR VLL+YFGE   +PC NCD+CL PP+ +D T  A+KALS VYR  Q F
Sbjct: 372 LLAYAESPRCRRVVLLDYFGE-ASEPCNNCDVCLTPPELWDGTVAAQKALSVVYRTGQRF 430

Query: 434 GIGYVVEVLRGMQNIRIREHGHDKITTYGIGRDHSHDYWVSIFRQLIHKGMLYQNITRNS 493
           G+ ++++VLRG  + ++++ GHD + T+G+G D     W ++FRQL+  GML  ++  + 
Sbjct: 431 GVVHLIDVLRGKVSDKVKQWGHDALPTFGVGADLDDGAWRAVFRQLVAGGMLTADLAEHG 490

Query: 494 TLQLTEEARPLLRGEMNIELA--VPRLDTAARAAKS------DKLSGKNY-DKKLFAKLR 544
            ++LT+ ARP+LRGE  +++   V R   +   +KS       KL      D+ LF  LR
Sbjct: 491 AMKLTDAARPVLRGEQTLQMRRHVARKGGSGGGSKSRSERAPTKLDDMTLEDQSLFEDLR 550

Query: 545 KLRKSIADDEGLPPYVVFSDATLIDMAEIMPTSYGEMLAVNGVGQRKLEKYADPFLDLIQ 604
           + R + A ++G+P YV+  D TL ++AE  PT+  +++ ++G+G  KLE+Y D  L +I+
Sbjct: 551 QWRAATAKEQGVPAYVILHDKTLKELAEERPTTRDQLMNISGMGTAKLERYGDDLLGIIR 610