Pairwise Alignments

Query, 611 a.a., DNA helicase RecQ from Vibrio cholerae E7946 ATCC 55056

Subject, 641 a.a., DNA/RNA helicase, superfamily II from Dechlorosoma suillum PS

 Score = 76.6 bits (187), Expect = 3e-18
 Identities = 89/352 (25%), Positives = 141/352 (40%), Gaps = 41/352 (11%)

Query: 25  GYQQFRVGQQEVIEAALAGRDSLVIMPTGGGKSLCYQIPALVLEGVT------LVISPLI 78
           GY+     Q E I   + G+D L +  TG GK+  + +P L    VT      LV++P  
Sbjct: 25  GYETPSSIQAECIPLLMEGKDLLGMAQTGTGKTAAFALPLLQKLDVTQRFPQALVLAPTR 84

Query: 79  SLMKDQVDQLKANGVAAECVNST--LAREELIAIYNRMHAG-QLK-------LLYVSPER 128
            L         A  VA  C      L    ++ IY     G QLK       ++  +P R
Sbjct: 85  EL---------AIQVAEACQKYAKHLPGFHVLPIYGGQSLGIQLKQLQRGAHVIIGTPGR 135

Query: 129 VLTAEFIERLSHLPLAMIAVDEAHCISQWGHDFRPEYASLGQLKQRFPNVPVMALTATAD 188
           V+     + L    L  + +DEA  + + G         +  ++    ++P    TA   
Sbjct: 136 VMDHLERKSLDLSRLKTLVLDEADEMLRMGF--------IDDVEWILEHIPAERQTALFS 187

Query: 189 DATRHDIMQRLQ--LNEPHQY-----LGSFDRPNIRYMLVEKHKPVSQVIRYLETQRG-Q 240
                 I +  Q  L +P +        +      RY  V     +  + R +E +    
Sbjct: 188 ATMPEQIRRVAQKYLRDPQEVKIKSATSTVSAIQQRYWQVSGLHKLDALTRIMEVEDSLD 247

Query: 241 CGIIYCGSRKKVEMLTEKLCGNHIRAASYHAGMDADERAWVQEAFQRDDLQIVVATVAFG 300
             II+  ++   E L +KL      AA+ +  M+   R  V E  +   L IV+AT    
Sbjct: 248 AAIIFVRTKTATEELAQKLEARGYAAAALNGDMNQASRERVIEQLKSGGLDIVIATDVAA 307

Query: 301 MGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMMLYDPADMNWLR 352
            GI+ P V  V+++DIP ++E+Y    GR GR G    A++   P +M  LR
Sbjct: 308 RGIDVPRVSHVINYDIPYDVEAYVHRIGRTGRAGRTGTAILFVSPREMRMLR 359