Pairwise Alignments

Query, 611 a.a., DNA helicase RecQ from Vibrio cholerae E7946 ATCC 55056

Subject, 644 a.a., ATP-dependent DNA helicase RecQ from Paraburkholderia graminis OAS925

 Score =  528 bits (1359), Expect = e-154
 Identities = 280/621 (45%), Positives = 397/621 (63%), Gaps = 23/621 (3%)

Query: 5   LMAESSALFATPERVLHEVFGYQQFRVGQQEVIEAALAGRDSLVIMPTGGGKSLCYQIPA 64
           L A S    + P  +L+EVFGY  FR  Q E++E    G D LV+MPTGGGKSLCYQIP+
Sbjct: 22  LYAASLKFMSRPLEILNEVFGYPAFRGQQGEIVEHVAGGGDCLVLMPTGGGKSLCYQIPS 81

Query: 65  LVLE----GVTLVISPLISLMKDQVDQLKANGVAAECVNSTLAREELIAIYNRMHAGQLK 120
           LV      G  +V+SPLI+LM+DQV  L   GV A  +NSTL+  E +A    +  G++ 
Sbjct: 82  LVRREGGFGTGIVVSPLIALMQDQVAALTEVGVRAAYLNSTLSSAEAMATERALRDGEID 141

Query: 121 LLYVSPERVLTAEFIERLSHLPLAMIAVDEAHCISQWGHDFRPEYASLGQLKQRFPNVPV 180
           LLYV+PER++T  F E L    + + A+DEAHC+SQWGHDFRPEY  L  L +RFPNVP 
Sbjct: 142 LLYVAPERLMTPRFQELLERTRIGLFAIDEAHCVSQWGHDFRPEYIQLSVLHERFPNVPR 201

Query: 181 MALTATADDATRHDIMQRLQLNEPHQYLGSFDRPNIRYMLVEKHKPVSQVIRYLETQRGQ 240
           +ALTATAD  TR +I+ RL L++   ++ SFDRPNIRY +VEK    +Q++ ++  +  +
Sbjct: 202 IALTATADAITRDEIIHRLALDDARIFVSSFDRPNIRYRIVEKDNARTQLLDFIRAEHTR 261

Query: 241 ------CGIIYCGSRKKVEMLTEKLCGNHIRAASYHAGMDADERAWVQEAFQRDDLQIVV 294
                  G++YC SR+KVE   E L    +RA  YHAGM+ + R   QE FQR++  ++ 
Sbjct: 262 ADGTTDAGVVYCLSRRKVEETAEWLKEKGMRALPYHAGMEFETRQKHQEMFQREEGIVMC 321

Query: 295 ATVAFGMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMMLYDPADMNWLRRM 354
           AT+AFGMGI+KP+VRFV H D+P+++E YYQETGRAGRDG+PA A M Y   D+   R+M
Sbjct: 322 ATIAFGMGIDKPDVRFVAHLDLPKSVEGYYQETGRAGRDGMPANAWMAYGLGDVVQQRKM 381

Query: 355 LDEK-PDGAQKQVESHKLTAMGAFAEAQTCRRQVLLNYFGEYRDKPCGNCDICLDPPKRF 413
           +DE   D A K+V++ KL A+    EA TCRR  LL YFGE   KPCGNCD CL+PP  +
Sbjct: 382 IDESDADDAHKRVQTGKLDALLGLCEAATCRRVRLLAYFGE-SSKPCGNCDNCLEPPATW 440

Query: 414 DATEEARKALSCVYRVNQ----NFGIGYVVEVLRGMQNIRIREHGHDKITTYGIGRDHSH 469
           DAT EA+ ALSCV+R  +    +FG G+++++LRG ++ +I + GH+K+TT+GIG     
Sbjct: 441 DATREAQMALSCVFRAQRASGFHFGAGHLIDILRGNRSEKIVQRGHEKLTTFGIGAALGE 500

Query: 470 DYWVSIFRQLIHKGMLYQNITRNSTLQLTEEARPLLRGEMNIEL------AVPRLDTAAR 523
             W ++FRQL+  G L  +     +L LTE ++P+L+GE N+ +         R  +   
Sbjct: 501 PEWRAVFRQLVAFGYLTVDHEGFGSLVLTEASKPVLKGEQNVTMRRYVKPTRTRQSSGRT 560

Query: 524 AAKSDKLSGKN-YDKKLFAKLRKLRKSIADDEGLPPYVVFSDATLIDMAEIMPTSYGEML 582
           + ++D   G    ++  + +LR  R   A  +G+P YV+F DATL ++A   P S  ++ 
Sbjct: 561 SERADPTIGMGPRERARWERLRTWRTETAKSDGVPAYVIFHDATLAEIARNGPDSIEDLR 620

Query: 583 AVNGVGQRKLEKYADPFLDLI 603
            + G+G RKL+++ D  L+++
Sbjct: 621 GIPGMGARKLDRFGDELLEVV 641