Pairwise Alignments

Query, 302 a.a., protein RarD from Vibrio cholerae E7946 ATCC 55056

Subject, 292 a.a., membrane protein, putative from Pseudomonas fluorescens FW300-N2E2

 Score = 48.5 bits (114), Expect = 2e-10
 Identities = 52/178 (29%), Positives = 84/178 (47%), Gaps = 11/178 (6%)

Query: 10  AKKGILLAISAYTMWGIAPIYFKALGAVSALEILSHRVVWSFVLLAVLIHLGRRW-RSVV 68
           A KGI+L + A  ++       K L     + +    VVW+  ++  L+  G    RS +
Sbjct: 13  AFKGIVLILVATFLFTSHDALAKYLSGFYPIVM----VVWARYVVHTLLMAGIFLPRSGL 68

Query: 69  GVVHTPRKFWLLLVTALLVGGNWLIFIWSINANHMLDASLGYYINPLLNVLLGMLFLGER 128
            V+ T R  W L   AL + G  L F  ++    + +A+   ++ P+L   L +  LGE 
Sbjct: 69  RVLRTKRPLWQL-ARALCLLGTSLFFTTALMFIPLAEATAVNFLAPVLVTALSVPLLGEH 127

Query: 129 LRKLQWFAVALAAIGVGIQLVVFGSVPIVAIAL----ATSFGFYGLLRKKI-QVDAQT 181
           + + QW AV    IGV I +   G +   A+ L    A  F FY LL +K+ ++D+ T
Sbjct: 128 VTRGQWVAVIFGFIGVLIIVHPGGDLFTPAVLLPFCSALFFCFYQLLTRKLSEIDSPT 185