Pairwise Alignments

Query, 302 a.a., protein RarD from Vibrio cholerae E7946 ATCC 55056

Subject, 295 a.a., Protein rarD from Pseudomonas fluorescens FW300-N2E2

 Score =  260 bits (664), Expect = 3e-74
 Identities = 128/285 (44%), Positives = 190/285 (66%), Gaps = 6/285 (2%)

Query: 11  KKGILLAISAYTMWGIAPIYFKALGAVSALEILSHRVVWSFVLLAVLIHLGRR---WRSV 67
           ++G +L +SAY +WG+ PIYFKA+ +V ++EI+ HRV+WS +  A L+ + +    WR +
Sbjct: 7   RRGYILGLSAYIIWGLFPIYFKAIASVPSVEIIIHRVLWSALFGAALLLVWKHPGWWREL 66

Query: 68  VGVVHTPRKFWLLLVTALLVGGNWLIFIWSINANHMLDASLGYYINPLLNVLLGMLFLGE 127
                 P++  +L ++  L+  NWL ++W++N   ML+ASLGYYINPL+NVLLGML LGE
Sbjct: 67  RD---NPQRLAILALSGTLIAANWLTYVWAVNNERMLEASLGYYINPLVNVLLGMLILGE 123

Query: 128 RLRKLQWFAVALAAIGVGIQLVVFGSVPIVAIALATSFGFYGLLRKKIQVDAQTGLFLET 187
           RLR++QW AV LAA+GV  Q+   GS+P V++ LA +FGFYGL+RK+  V A  GL +ET
Sbjct: 124 RLRRMQWLAVGLAAVGVAQQVWQVGSLPWVSLVLALTFGFYGLIRKQAPVKALPGLVVET 183

Query: 188 LFMLPAAAIYLIWLADTPTSDMALNTWQLNLLLVCAGVVTTLPLLCFTGAAARLKLSTLG 247
             ++P A  +L++     ++  A  T      LV AG VT +PL+CF  A   L  +T+G
Sbjct: 184 WMLVPIAIAWLLFNPTATSAQAAFWTTSEAWWLVAAGPVTLVPLVCFNAATRHLPYTTIG 243

Query: 248 FFQYIGPSLMFLLAVLVYGEAFTSDKAITFAFIWSALVIFSVDGL 292
           F QYI P+L+ LLAV+++GE  +S   + F FIW+ L ++SVD +
Sbjct: 244 FLQYIAPTLVLLLAVMLFGEHLSSSTLVAFLFIWAGLAVYSVDAV 288