Pairwise Alignments

Query, 302 a.a., protein RarD from Vibrio cholerae E7946 ATCC 55056

Subject, 294 a.a., Protein rarD from Pseudomonas fluorescens FW300-N2E2

 Score =  131 bits (330), Expect = 2e-35
 Identities = 86/299 (28%), Positives = 150/299 (50%), Gaps = 17/299 (5%)

Query: 12  KGILLAISAYTMWGIAPIYFKALGAVSALEILSHRVVWSFVLLAVLIHLGRRWRSVVGVV 71
           KGI L++SA  ++ +   Y   L  ++ +EI   R++ +   +   + + R W+ V  ++
Sbjct: 3   KGIALSVSASALFAVMYYYTSLLSPLTGVEIFGWRMLLTMPCMTAFMLVTREWKLVTALI 62

Query: 72  H----TPRKFWLLLVTALLVGGNWLIFIWSINANHMLDASLGYYINPLLNVLLGMLFLGE 127
                TPR     + ++ L+G    +F+W+    + LD SLGY++ PL  VL G +  GE
Sbjct: 63  QRLIATPRLLIAAIASSALMGAQLWLFMWAPLNGYSLDVSLGYFLLPLSMVLTGRIVYGE 122

Query: 128 RLRKLQWFAVALAAIGVGIQLVVFGSVPIVAIALATSFGFYGLLRKKIQVDAQTGLFLET 187
           RL  LQ  AV  A +GV  +L   G      + +   +  Y +LRK+I+ D   GL+L+ 
Sbjct: 123 RLSYLQKVAVFFATLGVFNELYQVGGFSWATLLVVIGYPIYFILRKRIKTDNLGGLWLDM 182

Query: 188 LFMLPAAAIYLIWLADTPTSDMALNTWQ----LNLLLVCAGVVTTLPLLCFTGAAARLKL 243
             MLP A    +W     + +  L+ +     L+LL+   GV++   L+ +  A+  L  
Sbjct: 183 TLMLPVA----LWFVQ--SGEQGLDVFDQYPWLSLLIPVLGVISASALVSYIVASRLLPF 236

Query: 244 STLGFFQYIGPSLMFLLAVLVYGEAFTSDKAITFAFIWSALVIFSVDGLKAGHAARRAR 302
           S  G   Y+ P L+  +A+L+ GE+  + + +T+  IW A+ +   +G K  H  R+ R
Sbjct: 237 SLFGLLSYVEPVLLLGVALLL-GESIKAGEWLTYIPIWMAVAVLVFEGFK--HLVRQQR 292