Pairwise Alignments

Query, 302 a.a., protein RarD from Vibrio cholerae E7946 ATCC 55056

Subject, 309 a.a., rarD protein from Pseudomonas fluorescens FW300-N2E2

 Score =  174 bits (442), Expect = 2e-48
 Identities = 100/298 (33%), Positives = 170/298 (57%), Gaps = 4/298 (1%)

Query: 7   QQDAKKGILLAISAYTMWGIAPIYFKALGAVSALEILSHRVVWSFVLLAVLIHLGRRWRS 66
           + ++ +G+   + A  +WG  P+++K L  + A  +LS RVV++ + L  L+ L  R  +
Sbjct: 4   RNESGQGVAFGLGATLLWGSYPLWYKPLAGLDAYHLLSWRVVFAELFLVALVLLTARVST 63

Query: 67  VVGVVHTPRKFWLLLVTALLVGGNWLIFIWSINANHMLDASLGYYINPLLNVLLGMLFLG 126
           +   + T R   +L V+A+L G  WL++I++I    +L+ + GY+++P++++L+  L   
Sbjct: 64  LRSTLKTVRPVNVLTVSAVL-GLWWLMYIYAIMTGRVLEVAFGYFLSPIMSMLVSRLVFK 122

Query: 127 ERLRKLQWFAVALAAIGVGI---QLVVFGSVPIVAIALATSFGFYGLLRKKIQVDAQTGL 183
           ERL  LQ +A+ LA  GV +   +L+   S P +A+ +   + FYGL +KK+  D     
Sbjct: 123 ERLSVLQTWAIFLAVAGVTLMAFELLNLHSFPWIALVIGFCYSFYGLFKKKVPGDPVVIQ 182

Query: 184 FLETLFMLPAAAIYLIWLADTPTSDMALNTWQLNLLLVCAGVVTTLPLLCFTGAAARLKL 243
            LE   +LP AA++L+           L +   +LLLV  G++T LPL  ++ AA +L +
Sbjct: 183 TLEIAVLLPFAAVFLLLAQAHGVGHQFLQSGTRDLLLVATGLITVLPLWWYSLAAKQLSM 242

Query: 244 STLGFFQYIGPSLMFLLAVLVYGEAFTSDKAITFAFIWSALVIFSVDGLKAGHAARRA 301
             LGF Q++ P   FLLA  VYGE  ++ K   F+FIW AL +F+ + ++A  AA  A
Sbjct: 243 IALGFLQFVPPICNFLLAAFVYGEPVSALKLAAFSFIWLALALFTWNSIRAQRAAAAA 300