Pairwise Alignments

Query, 302 a.a., protein RarD from Vibrio cholerae E7946 ATCC 55056

Subject, 296 a.a., rarD protein from Pseudomonas stutzeri RCH2

 Score =  261 bits (666), Expect = 2e-74
 Identities = 130/283 (45%), Positives = 192/283 (67%), Gaps = 6/283 (2%)

Query: 11  KKGILLAISAYTMWGIAPIYFKALGAVSALEILSHRVVWSFVLLAVLIHLGRR---WRSV 67
           +KG LL ++ +++WG+ P+YFKAL    ALEI++ RV+WS V  ++++ + R    WR +
Sbjct: 7   RKGYLLGLATFSIWGMFPLYFKALEQYGALEIVTQRVIWSAVFGSLVLLVWRHPGWWREL 66

Query: 68  VGVVHTPRKFWLLLVTALLVGGNWLIFIWSINANHMLDASLGYYINPLLNVLLGMLFLGE 127
           +     PR+  +L ++++L+  NWLI++W++N + M++ASLGYYINPL+NVLLGML L E
Sbjct: 67  LA---HPRRLGVLGISSVLIAANWLIYVWAVNHDRMVEASLGYYINPLVNVLLGMLVLRE 123

Query: 128 RLRKLQWFAVALAAIGVGIQLVVFGSVPIVAIALATSFGFYGLLRKKIQVDAQTGLFLET 187
           RLR LQW AVA+A +GV +QL++ G  P ++I LA SFG YGLLRK   V A  GL +ET
Sbjct: 124 RLRPLQWLAVAMATVGVSLQLLMLGEFPWISIVLALSFGSYGLLRKLAPVAALPGLVVET 183

Query: 188 LFMLPAAAIYLIWLADTPTSDMALNTWQLNLLLVCAGVVTTLPLLCFTGAAARLKLSTLG 247
             +LP A ++L W +   +++ A  T    L L+ AG VT +PLL F  AA  L  STLG
Sbjct: 184 WMLLPVALVWLFWFSSGTSTEPAFWTSSDALWLMAAGPVTLIPLLGFNAAARHLPYSTLG 243

Query: 248 FFQYIGPSLMFLLAVLVYGEAFTSDKAITFAFIWSALVIFSVD 290
           F QY+ P+L+ +LAV ++GE F  D+ + F  IW+ L ++S+D
Sbjct: 244 FLQYLTPTLLLILAVQLFGEPFPVDRQLAFFCIWAGLAVYSLD 286